Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4181 ATGGCTTTGCGCTTTCATGAGCCATATGAAGCACATTGGCATCCTGAAGCTTTTTCAAAGATGTGTAATCTCAAATTACTTATTCTATCAAGCGATCATTGGAGCCAACCAATTCATGAAATGAAACTTTCGTTTGGTCTCAAATGTCTTCCTAGTGCATTAAAAGTTGTTCAATGGTGGGGATATCCTCTAGAATCTCTTCCACTTCAAACCCCATTGGATGAACTTGTTGATGTTTCAATGCAGTATAGCAAAATAAAGCAACTTTGGAATGGTATCAAGTGTTTAGGAATGCTGAAGTTTCTTGATTTCAGCCATTCCAAATATTTGATTGAAACTCCAAATTTTTCTGGAGTTCCAAATTTAGAAAGATTAATACTTCAAAGCTGCACATCCCTCGTCAAGGTTCATCCTTCCCTTGGAGAGCTCAAGAAGCTTGTACTAGTGAATTTGAGAGATTGCAAAACTCTTAAAATACTTCCAAGAAAATTGGAAATGAATTCTCTAAAGGATTTGGTTCTTGGTGGGTGCTCTAAAATTGCAAAACTCCCAGAGTTCgggaaaagtatgaaagatctAATTTCTATTGATCTAGAAGATACTGTTATCACAGAACTTCCTGAATCACTTGAATTCCTGACTGGTCTGAGAGATTTGAATTTAAATGGTTGCAAGAAACTTGTTTGCCTTCCACATACCTTTCACAAATTAAAGCATCTCAGAACTCTTACACTTCAAGGTTGTCTAGAATTTTCTAAGCTCCCagaaaatttgaatgaaaattcAGCCTTGGAAGACCTTGATGTGAGTGGAACTTCCATAAAAGAAGTACCATTATCCATCTTCCAACTAAGAAATCTCAAGGCAATTTCTTATGATGGAAGCAAATTATCATCATCCAACTCATGGAGTTTATCCCACATATTGTGGAAGATATTTGGAAGGCATCCAATTCCCATGTGGTTGTGGAGAATTGTGGGTTTAGTGTCAAGTCTAATTGGGGAAATCGCTTATGGTCTAAGCTCATCTTTCAAACATCTATGTGGAGAATGGAAGTGGTGGAAGATCATTGTCTATTCATTGTTGAGTTTCATGATCTGTAGTGTAGTACTGTTTGTGAGGAGAGCAAGACAAAGGTGGAAGACTCTACTGGTGAAAGCTCATGTAGCATTTGTGATATTGATGGCTTCTTCTTTATACTCCTATGTCTACGATAAATTCATGAGTGGAAAATCAAATGCGATCGATTTGATTTCTAGTGGTGCGTTTGCTTTGATGTCACTAAGTTTGTCAAGGCTGAGCGAACCTGGATTCGAAGCAGGTGTTTTCAACTTTTTGCTTGGATTTCTGACGCAACAGCTGATGAAGAACAACTTCGTTCTGGTTTTAGCTGCTGCGGGTGTCTGCTATTTCTTCATACTCGTTCGTTGCCTTTTGGAATCGCATTTCCAGCCACGAACAGAAATTGCGCGACTCCAAGTCCGCTGCTCCATTAATAGTATTGTAGATCTAGAAAATGAAAGTGATGATCCAGAGGTTAAAGGCGATGATCGAGAAAATCAATATGCAGATCGACGAGAAAATGAAGATGCGAATGATCTAGAAAATGAAAGTGAAGAAGAtctagaaaataaatttgttgATCCAGAGAATGAAATTGTAGATCTGGAGAATGAAGGTGCTGGTAATCTAGAAAATAAATTTGCTGAttcagaaaaagaaattgtagaTCTAGAGAATGTAGGTGCAAATAATCTAGAAAATGAAGTGTACGCTAACCGAAgcagagaaatagagagagatTACCAGGTCCGGCGAGAAACAGAAACTGCAAGAATTCAACACGAAGACGAATGCATCGTAAATATTGTTGATCCAGAAAATGAAGCATCGCTCAATCTAttcaagaaaagaagaagagaatgccAAATCCAGGCAGAGACAGAAACTGAAAGAGGCCAAGATCAGTGCGTCGTAAATATTGTTAATACACGATAA 1998 0.3599 MALRFHEPYEAHWHPEAFSKMCNLKLLILSSDHWSQPIHEMKLSFGLKCLPSALKVVQWWGYPLESLPLQTPLDELVDVSMQYSKIKQLWNGIKCLGMLKFLDFSHSKYLIETPNFSGVPNLERLILQSCTSLVKVHPSLGELKKLVLVNLRDCKTLKILPRKLEMNSLKDLVLGGCSKIAKLPEFGKSMKDLISIDLEDTVITELPESLEFLTGLRDLNLNGCKKLVCLPHTFHKLKHLRTLTLQGCLEFSKLPENLNENSALEDLDVSGTSIKEVPLSIFQLRNLKAISYDGSKLSSSNSWSLSHILWKIFGRHPIPMWLWRIVGLVSSLIGEIAYGLSSSFKHLCGEWKWWKIIVYSLLSFMICSVVLFVRRARQRWKTLLVKAHVAFVILMASSLYSYVYDKFMSGKSNAIDLISSGAFALMSLSLSRLSEPGFEAGVFNFLLGFLTQQLMKNNFVLVLAAAGVCYFFILVRCLLESHFQPRTEIARLQVRCSINSIVDLENESDDPEVKGDDRENQYADRRENEDANDLENESEEDLENKFVDPENEIVDLENEGAGNLENKFADSEKEIVDLENVGANNLENEVYANRSREIERDYQVRRETETARIQHEDECIVNIVDPENEASLNLFKKRRRECQIQAETETERGQDQCVVNIVNTR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4181 665 MobiDBLite consensus disorder prediction 507 532 - -
Sto5g4181 665 Gene3D Ribonuclease Inhibitor 11 188 IPR032675 -
Sto5g4181 665 MobiDBLite consensus disorder prediction 507 542 - -
Sto5g4181 665 PANTHER - 45 298 - -
Sto5g4181 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 298 IPR044974 GO:0006952
Sto5g4181 665 Coils Coil 561 581 - -
Sto5g4181 665 Pfam Leucine Rich Repeat 76 94 IPR011713 -
Sto5g4181 665 Gene3D Ribonuclease Inhibitor 189 313 IPR032675 -
Sto5g4181 665 Coils Coil 539 559 - -
Sto5g4181 665 SUPERFAMILY L domain-like 12 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4181 Sto-Chr5 50529988 50532154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4181 14 299 WRKY Transcription Factor Family AT4G12020 36.735 1.40e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4181 - - var:108321227 303.908