Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g4162 | TTGGGCCCCACCCCGCCCCATTTCAAATCCCACCGCATCTGGACCGAGCCCGACGAGATCCGGTTCCTCCGTGGCCTCCTCGACTCTGCCTCCGACAGCCTCGTCTTACCGCGAGACCTTCCCATCTTCTATGAACGCTTCTCCCGCACCGTGTCCCAACCCTACACCAAGTCTCAACTCTCCGAGAAGCTCCGTCACCTCCGGAAGAAGTTCTGCCTCGTCTCCTCTCGCCTCGCAAACAGGGGATTTTCTGGGGAGTTGAAATCCTACGTGAGAGAGGAAGATGGATCGTTGATACTGAAATTGGCTGGAGGATTGATGACGTTGGGAATGAGAAGTTCTATGGTGCAGCAAGAGGAAGATGTGAAGGATTGGCCATGGCCTTTCCAGGGAAAGATgtacaagaagaagaaacaagttGATAAACAAGGACCTTCAAGTGGTCATTTGGATATACAGGAtcaagaaatggacataaggaaaattatgaaggatgttgaaaattttgGCTACTCACATATGTCATGGAAAGAGCGTAAAAAGATTGAAGATAAGAAGATTGTTTCTCTCGGCGGGAAGGCCCCTAAGAAGCAGAGATTACCTTTAAGTGTGGCCAGGCCAATGATGAAAAAACAAAAGGAGAGAGAGCAAGCAATGCTCCAAGAGCGTCTGATTCTTGGACAATTTGGGGGAAAGTTTGGTGGTGGCAGTAAAAGATCAGTGGGGAAGCACAAACCTGGGGACAGAGGTCTGAAGGCAAGTGAAGGTCGTTTTAAAAATGGCGTCCTCAATGTGGGGCATTTGTTAAATTCAGCACCATCCAGAGATAATGCTACTACTGAAACCCATGTGTCCAGtggtgggaagaagaagaaaggaaataaGATGAAGAAGTTTGATCAATCAAATATTTTCCACACTGTTTTTGTCCAGAGCTATTATCCATTTGACAGTGTGATGTTTttggggaaaaagaaaaaaactggtTCACCATGTGATCTTCCACATGAATATGATATTCCTGACATACTTGTCATCTGCTTGAAAGCCGATTTTGATCTGACAGGGCAGTTGGTGTGGCCTGGAGCCATGCTGCTAAATGATTATTTCTCAAAAAATAGTGAGATACTTCAGGGTCGCTCTGCCATTGAATTAGGTTCTGGTGTTGGGATTACTGGGGTACTTTGTGGTAGATTCTGCCAGAAAGTGGTGTTAACAGATCATAATGATGAAATCCTGAAGAAAAATATAGAGCTGCATTCACTTCCTGAGAATAGTAGTCCTACTCCTAATGGATTAGAAGCTGAGAAACTAGAATGGGGGAACTCTGATCAGATCAATCAGATTTTACAAAAGCATCCAGGAGGATTTGACTTGATTCTTGGAGCTGACATATATATCCATAATGCTTTTATATCACTTTCATTTTAA | 1431 | 0.4151 | LGPTPPHFKSHRIWTEPDEIRFLRGLLDSASDSLVLPRDLPIFYERFSRTVSQPYTKSQLSEKLRHLRKKFCLVSSRLANRGFSGELKSYVREEDGSLILKLAGGLMTLGMRSSMVQQEEDVKDWPWPFQGKMYKKKKQVDKQGPSSGHLDIQDQEMDIRKIMKDVENFGYSHMSWKERKKIEDKKIVSLGGKAPKKQRLPLSVARPMMKKQKEREQAMLQERLILGQFGGKFGGGSKRSVGKHKPGDRGLKASEGRFKNGVLNVGHLLNSAPSRDNATTETHVSSGGKKKKGNKMKKFDQSNIFHTVFVQSYYPFDSVMFLGKKKKTGSPCDLPHEYDIPDILVICLKADFDLTGQLVWPGAMLLNDYFSKNSEILQGRSAIELGSGVGITGVLCGRFCQKVVLTDHNDEILKKNIELHSLPENSSPTPNGLEAEKLEWGNSDQINQILQKHPGGFDLILGADIYIHNAFISLSF | 476 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g4162 | 476 | MobiDBLite | consensus disorder prediction | 269 | 295 | - | - | |
Sto5g4162 | 476 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 358 | 465 | IPR029063 | - | |
Sto5g4162 | 476 | Pfam | Lysine methyltransferase | 355 | 472 | IPR019410 | - | |
Sto5g4162 | 476 | Gene3D | Vaccinia Virus protein VP39 | 334 | 474 | IPR029063 | - | |
Sto5g4162 | 476 | PANTHER | METHYLTRANSFERASE-RELATED | 346 | 470 | IPR038899 | GO:0006479|GO:0008276 | |
Sto5g4162 | 476 | MobiDBLite | consensus disorder prediction | 270 | 284 | - | - | |
Sto5g4162 | 476 | Pfam | Protein of unknown function, DUF573 | 11 | 79 | IPR007592 | GO:0006355 | |
Sto5g4162 | 476 | Pfam | Domain of unknown function (DUF4602) | 135 | 240 | IPR027973 | - | |
Sto5g4162 | 476 | MobiDBLite | consensus disorder prediction | 235 | 254 | - | - | |
Sto5g4162 | 476 | PANTHER | METHYLTRANSFERASE FAMILY PROTEIN-RELATED | 346 | 470 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g4162 | Sto-Chr5 | 50371438 | 50380991 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto5g4162 | 11 | 79 | GeBP Transcription Factor Family | AT5G28040 | 38.889 | 7.87e-08 | 52.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GeBP | Sto5g4162 | Methyltransf_16 | 7e-14 | CL0063 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g4162 | - | - | pvu:PHAVU_002G255800g | 215.312 |