Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4162 TTGGGCCCCACCCCGCCCCATTTCAAATCCCACCGCATCTGGACCGAGCCCGACGAGATCCGGTTCCTCCGTGGCCTCCTCGACTCTGCCTCCGACAGCCTCGTCTTACCGCGAGACCTTCCCATCTTCTATGAACGCTTCTCCCGCACCGTGTCCCAACCCTACACCAAGTCTCAACTCTCCGAGAAGCTCCGTCACCTCCGGAAGAAGTTCTGCCTCGTCTCCTCTCGCCTCGCAAACAGGGGATTTTCTGGGGAGTTGAAATCCTACGTGAGAGAGGAAGATGGATCGTTGATACTGAAATTGGCTGGAGGATTGATGACGTTGGGAATGAGAAGTTCTATGGTGCAGCAAGAGGAAGATGTGAAGGATTGGCCATGGCCTTTCCAGGGAAAGATgtacaagaagaagaaacaagttGATAAACAAGGACCTTCAAGTGGTCATTTGGATATACAGGAtcaagaaatggacataaggaaaattatgaaggatgttgaaaattttgGCTACTCACATATGTCATGGAAAGAGCGTAAAAAGATTGAAGATAAGAAGATTGTTTCTCTCGGCGGGAAGGCCCCTAAGAAGCAGAGATTACCTTTAAGTGTGGCCAGGCCAATGATGAAAAAACAAAAGGAGAGAGAGCAAGCAATGCTCCAAGAGCGTCTGATTCTTGGACAATTTGGGGGAAAGTTTGGTGGTGGCAGTAAAAGATCAGTGGGGAAGCACAAACCTGGGGACAGAGGTCTGAAGGCAAGTGAAGGTCGTTTTAAAAATGGCGTCCTCAATGTGGGGCATTTGTTAAATTCAGCACCATCCAGAGATAATGCTACTACTGAAACCCATGTGTCCAGtggtgggaagaagaagaaaggaaataaGATGAAGAAGTTTGATCAATCAAATATTTTCCACACTGTTTTTGTCCAGAGCTATTATCCATTTGACAGTGTGATGTTTttggggaaaaagaaaaaaactggtTCACCATGTGATCTTCCACATGAATATGATATTCCTGACATACTTGTCATCTGCTTGAAAGCCGATTTTGATCTGACAGGGCAGTTGGTGTGGCCTGGAGCCATGCTGCTAAATGATTATTTCTCAAAAAATAGTGAGATACTTCAGGGTCGCTCTGCCATTGAATTAGGTTCTGGTGTTGGGATTACTGGGGTACTTTGTGGTAGATTCTGCCAGAAAGTGGTGTTAACAGATCATAATGATGAAATCCTGAAGAAAAATATAGAGCTGCATTCACTTCCTGAGAATAGTAGTCCTACTCCTAATGGATTAGAAGCTGAGAAACTAGAATGGGGGAACTCTGATCAGATCAATCAGATTTTACAAAAGCATCCAGGAGGATTTGACTTGATTCTTGGAGCTGACATATATATCCATAATGCTTTTATATCACTTTCATTTTAA 1431 0.4151 LGPTPPHFKSHRIWTEPDEIRFLRGLLDSASDSLVLPRDLPIFYERFSRTVSQPYTKSQLSEKLRHLRKKFCLVSSRLANRGFSGELKSYVREEDGSLILKLAGGLMTLGMRSSMVQQEEDVKDWPWPFQGKMYKKKKQVDKQGPSSGHLDIQDQEMDIRKIMKDVENFGYSHMSWKERKKIEDKKIVSLGGKAPKKQRLPLSVARPMMKKQKEREQAMLQERLILGQFGGKFGGGSKRSVGKHKPGDRGLKASEGRFKNGVLNVGHLLNSAPSRDNATTETHVSSGGKKKKGNKMKKFDQSNIFHTVFVQSYYPFDSVMFLGKKKKTGSPCDLPHEYDIPDILVICLKADFDLTGQLVWPGAMLLNDYFSKNSEILQGRSAIELGSGVGITGVLCGRFCQKVVLTDHNDEILKKNIELHSLPENSSPTPNGLEAEKLEWGNSDQINQILQKHPGGFDLILGADIYIHNAFISLSF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4162 476 MobiDBLite consensus disorder prediction 269 295 - -
Sto5g4162 476 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 358 465 IPR029063 -
Sto5g4162 476 Pfam Lysine methyltransferase 355 472 IPR019410 -
Sto5g4162 476 Gene3D Vaccinia Virus protein VP39 334 474 IPR029063 -
Sto5g4162 476 PANTHER METHYLTRANSFERASE-RELATED 346 470 IPR038899 GO:0006479|GO:0008276
Sto5g4162 476 MobiDBLite consensus disorder prediction 270 284 - -
Sto5g4162 476 Pfam Protein of unknown function, DUF573 11 79 IPR007592 GO:0006355
Sto5g4162 476 Pfam Domain of unknown function (DUF4602) 135 240 IPR027973 -
Sto5g4162 476 MobiDBLite consensus disorder prediction 235 254 - -
Sto5g4162 476 PANTHER METHYLTRANSFERASE FAMILY PROTEIN-RELATED 346 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4162 Sto-Chr5 50371438 50380991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4162 11 79 GeBP Transcription Factor Family AT5G28040 38.889 7.87e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Sto5g4162 Methyltransf_16 7e-14 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4162 - - pvu:PHAVU_002G255800g 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g4162 5 50371438 50380991 Sto5g4162 5 50371438 50380991 ECH