Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4149 ATGGAGGACATAAAGGTCACATACAACATAGGAAAGGAGATAGGAAAAGGAAACCTAGCGGTGACATATTTGTGCACACATAAGGTGACAAATGAGAAATTTGCATGCAAAACTATAGCAAAGAGGAAGCTTGTGAATAAAGAGGATATAGAGGATATAAGGAGGGAGGTCCAAATTATGCACCATTTGGTTGGTCAACCTAGCATTGTGGAGCTCAAGGGTACGTATGAGGACAAACAATCGGTGAACCTCGTCATGGAATTATGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGTCACTACACGGAGCGTGCCGCCGCTTCCTTGGTACGGACCATGGTTCAGATTGTTCATACTTGTCACTCCATGGGTGTCATTCACAAAGATCTCAAGCCTGAAAATTTTATCTTTCTCAATAAGGATGAGAATTCTCCCATAAAAGTCACCGATTTTAACCTTTCAGTCTTTTACAAAGGTTAA 489 0.4356 MEDIKVTYNIGKEIGKGNLAVTYLCTHKVTNEKFACKTIAKRKLVNKEDIEDIRREVQIMHHLVGQPSIVELKGTYEDKQSVNLVMELCAGGELFDRIIAKGHYTERAAASLVRTMVQIVHTCHSMGVIHKDLKPENFIFLNKDENSPIKVTDFNLSVFYKG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4149 162 SMART serkin_6 8 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4149 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Sto5g4149 162 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 1 161 - -
Sto5g4149 162 Gene3D Phosphorylase Kinase; domain 1 10 93 - -
Sto5g4149 162 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 161 - -
Sto5g4149 162 Gene3D Transferase(Phosphotransferase) domain 1 94 162 - -
Sto5g4149 162 Pfam Protein kinase domain 8 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4149 162 ProSiteProfiles Protein kinase domain profile. 8 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4149 162 SUPERFAMILY Protein kinase-like (PK-like) 8 160 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4149 Sto-Chr5 50229730 50230218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4149 1 161 EF-hand Containing Proteins AT5G12180 80.745 4.72e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto5g4149 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4149 K13412 - jre:109000584 286.189