Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4144 ATGGCAGAAATCGTAATAGCCATTACAAGCAAACTTGCAGAATATATGATTCAACCAACCATAACTCAAGCACGGTATTTGTTTTGTGGAGCAAAAATCACAAGAAACCTTGAATCTGAGAAAGAGAAGTTGGCAATAACACAAGAAAGCGTGCATAAACTTGTAGAAGAAGCCCTCAATAGAaccgaaatcatcaataaagCAGTTGAGAAGTGGCTTGAAGAAGTGAAACGCGTGCTAGCAGAAGTGGAGACTTTGGAACAAGAATCGAAGGCGAAAAATGGCTGTTTTCGAGGTTGGTATCCTAATTGGAGGAAATATAGTCTATCTAAGGAAATGATGAAGAAGATAGATGTAATGATGAAACTGAATACAAACAGGGGATTTACCCCTTTTTCATTCCGAGCTAGACTTCCAGATATAGAGTATTTCTCTTCTGAAAAATTTGTGTATTTCAAGTCTACAAAATTGGCTTCTGATGAGCTTTTGAAGGCACTAGGAGATGATAGTAGCCATATGATTGGGTTGTACGGGATGGGAGGTTCGGGGAAAACGACATTGGCTAAAGAAGTAGgcaagaaagtcaaggaagcaAAGCTTTTTGATCATGTGATATTCACCACAGTGTCACACTCTCCCAATATTAAGAGGATCCAACAAGAAATTGCTGACTTGTTGGGTTTGAAACTTTATTCTGATGAAAGTAATGTTGGAAGGGCAAGAAAAATAGCATTCAGATTACAGAGTGGACAAAGTATTCTTGTGATATTGGATGATGTGTGGGAAATGCTCAATCTTGAGGATATTGGGATTCCTGTTGATGAAGATGGCTCCAGCTGCAAGATCATTTTAACCACTCGTCGTTTACAAGTATGTAATCTGATGGAATGTCAAAAGACAATTTCATTGAATCTCTTGTCTGAAGATGAAGCCTTGACCTTGCTCCAAAAGCATGCTGGTGTAGATGACAAATACTTCAAGCTATTAAATGGTTTGGCAGATGAAGTTTCTAGGGAATGTAAAGGACTACATATTGCAATTGAAGCCGTGGGAAAATCGTTGAAAGGAAAATCTATTGATGAGTGGAATGTAGCATTGGACAAGCTAAAGCATTCAAAACCTATTGACGTGGAAGATGGCGTGAAAGATGCTTTCGCTTGTATTAAATTAAGCTATGATTATTTGAGGAACAAAGAAGCAAGGATGCTCTTCTTGATGTGCAGTATGTTTCCAGAAGATCATGATATCTCTGTTGAAGATTTGTTTAGATATGGAATAGGGTTGGGTCTATGTGGGGAAGTGGACTCTTTCGAATTAGCGAGGAGTCAAATGAATGCGGGTATAAATAATCTCTTAAGCTCTTGTTTGTTGATGTGTTCTGAGAGAAAGAAAGACCATTTAAAGATGCATGATGTGGCTCGTGACGTAGCTTTGTGGATAGCACACAAGGAGGGATTCCCCATTCATGTAAATCTTGAAAAAAATATGAGCATGTTGTCTGATGATGGAGCTTTTAAAGATTGTTATGCTGTATCTTCATACTATGAGGAAATTGAACAACTTCCTCATCATTTGGATTCTCCAAAGCTTGAGATTCTGATACTAAATACTTCATGGTCGTTGCGATCATCTCGTGCTTCTTTTGAAGGTATAAAAGGGCTCAAGGTTATGGCTATAACTGctgtaaattattttaaaattgcataCTTATCACTCCCACAATCAACCTGGTCGTTGAATAATCTTCGAACTCTGCGCTTGGTAGAATGGCATTTAGATGACATCTCTTCAGTGGATCTTCTACGAAGAGCCGAAGATGTTTATTTGGGTTGCCATCAAGGAGCTTGCAAAAATATTATTCCAGAGTTGGTTCAAGCTGTAGGAGGCATGAATGAGTTGACTAAACTCAGGCTTGATGCTTGTTCAGAGATAGAATGTGTCATTGATACAAGTTCTTATTCATTTCAAGTGGATGCTGTGTACCCGAAATTAGTGAAACTAGTCCTGGAAAACATGGAGAATTTGAGTGAAGTAATTCGTGGTCCAAGTCTGGTTTACTTCTTCGAGAATTTGGAAGAGCTTCATTTAACACATTGCATCCAATTGCACAGCATATTTTCAAAGGAATGCAACTTGTGCAGTCTTAAGGTTCTAAAATTAGAACATTGTCCAACATTGATAACATCACTATTCCCTATGTCTGTAGCCCAAACCATGGTTCTCTTACAAGAGCTAACTGTAAAAAATTGCCATGAATTGAAGTGTTTAGTAACGAACGAAGGAGAGGAAATAATTCCAGATAATTCTGGTTTTCTGTTCCCCAAATTGAGGAATCTATCCGTTTCTTCTTGCCAGAAGTTAGAGTTCACATTCCCAATCTCCTGTGTTCAAGGCCTTGAGCAACTACAAGAGATAAGTATAGTTAATGCTTCTAAGTTGAAATATGTGTTTGGTCACCATGGCCACGAAGGCCAATTGTCAAATCAGACTGAAATTTCGTTTCCCCTTCTAAGCATTCTTCGACTTGAGGGTCTCCCAAATCTTGTTAGCATTTTTCCAGAAAACAATCCTTCAAGGTGGCCATCTCTAACGGAGCTACACTGGGGGCAGGGGGCACTTGAGACAGGCAAGAACCAGTTGAGTAATGAAGTATTACTACCAATTGTTTTAGAAGTAAGAGAAGTTGAGATTCAAAATTGTGCAGTAGTAAACATATTCCACCTAGAGAGAGTCGAGCAGGTCATGGAATCTAAACTGGAAACACTGAGGTTAACAAATCTTCCAGAATTGAAGTCTATATGGATGGGATGCTCTTCCACACAAATTCTAACCCTTCAATACCTCCAACATTTAGAAGTGCATCATTGTGGAAAATTGAAATCTATATTCTCTTCCATGATATATACTTTTAGCATTCCATTGTTGACAAACTTAATCATATCTGATTGtgaggaattggaggaaataatTGCAGAAAATGAAGAACCTCAGAACCTAGTTAATTCTCAAATTTGCTTTCCAAAGCTCAGAGAGTTGCAGGTGTTGCAGTGTAACAAGTTGAAAAGGCTTTTCTCTACTGTTGTGGCTAGAATGCTTCCAAATCTAAAGTTTCTGAGTATCGTAGAGGCTGCTGAACTGTTGGTGGTTTTCAAACGCAAAAATGGAGAATGCACCAATAGCCAAGACAAAATTGAGCTCCCAAATTTGAGAAAGATACAACTCAAGAAATTGCCAAATCTTATTGAGTTCTGCCAAGAGGAAGTCTTGCTCCCGACTTTACGAATAGTTGAGCTAACATCATTGCCAAGTCTGACTGAGTTTTGCCAAGGTTTTAGATTATCTTCTGTGAAGCTTCACAAGGTGGTCATTGAGGGATGCCCCAAACTGAATTCAATTTCAGAACAAAGTCAACTCATTGCTTTACCCCAAAGAACGAAGGGGGAACAGACAAATAGGCCAAGTGGCAGTAAATTACGTAATAAAGCTTCTGCTTTGCTACCTGATGATTTAAATGTTCATCATCTTGTGATTGAAAATTGCTTGGCAATTAATCTATTTTATCCCGAGGGAGTTGAGTCTGTGTCATCAAAATTAGTAAGCTTACGTTTAAGGAATTTGCCTAAGATGAGGCTCATATGGATGGATTGTACACACGTTGTGAGCCTCCATGGTCTTCAAGAATTAAGTGTATATAATTGTGGAAAGTTAAAATCCGTCTTCTCCACGGTCCTTCAGAGAAGCCTACCACAGTTAATGCACCTAAGCATATCTCATTGTAAGGATTTGAAGGAAATTATTGCTGAGGATGATGACACTCAAAATCCATTGAATTCTCAAGTGTGTTTCCCAAAACTAGAAAGTTTAAGGGTGGAGAAGTGCCACAAATTGAAAAGAGTTTTCCCTACCAGCATGGAAACAATGCTTCCACAACTAGAATCTCTAAGTATGTCAGATTGTGATCAACTAAAGGAGATTTTTGGATGTGGAAATATTGAAGGTAGCAGCTTTGACAAAAGGAAAGAAGTTGTACTTCCTAACTTGAGACATGTGAATCTTCAACAACTGCCTAATCTCAGTGACATTTGCAAAGGGTGCACATTACATGTGGTGCAGCTTAAGCGTTTAATGGTAATGGGGTGTGACAAGTTGAGAAGCGTTTTCTTTACAACTGTGGAAACAATGCTTCCACAACTAGGATTTCTAGATATATCAAACTGTGCTCAACTGAAGGAGATTCTTGGATGTGGAAATATTGAAGATAGCAGCATCAGCAACCGGAAGGAAATTATACTTccaaatttgagaaaattaagTCTTCATCAACTGCCGAATCTCATTGACATTTGCCAGGGGTTTATATTACATGCAGTGGAGCTTAATGATGTCAGCATAAGGGACTGCCCTAAATTTACTCCAATTTTAGGAGCTACTTCGGTTTGCCAAACGAAAGAGAGATGTTCAGATGGTGAGGTGGCACATGAAATCCAAGCTCTCCAAGCCATTCTGAATCTGAATGAAGGAGAAGAGGCGGGCATAACAAGTATTTTAACCTTATACCATATATCAAAACTGTACCGTTTTCTCCGTCCTCTTTTCTCATCTTCCTCGCCTCGTCTGCCCCTTTTCTGTCATCTCTCGCCCACCAACCTCCGCCGTTGCTCCGTCACGCCAGCACCATTACTCAACGGCAGTCCCTATTACTCCGTCCAGCCCATGCTGGCGGCATGTGGTGGCCTTCCTTCTCCGTGTTTCTGCAGAGAGTTTAAATCGGAGTCTTTTGTGAGTTTCTTCTACCCACCATTTCGCTTTCTCTTTCCATCTTCTAGGGTTGCAGAAGTTGGGGCTTATGAAGGTGATGCTTCAAGCTTCGAATTGAGACCTCCTAGCTTCTAA 4893 0.3883 MAEIVIAITSKLAEYMIQPTITQARYLFCGAKITRNLESEKEKLAITQESVHKLVEEALNRTEIINKAVEKWLEEVKRVLAEVETLEQESKAKNGCFRGWYPNWRKYSLSKEMMKKIDVMMKLNTNRGFTPFSFRARLPDIEYFSSEKFVYFKSTKLASDELLKALGDDSSHMIGLYGMGGSGKTTLAKEVGKKVKEAKLFDHVIFTTVSHSPNIKRIQQEIADLLGLKLYSDESNVGRARKIAFRLQSGQSILVILDDVWEMLNLEDIGIPVDEDGSSCKIILTTRRLQVCNLMECQKTISLNLLSEDEALTLLQKHAGVDDKYFKLLNGLADEVSRECKGLHIAIEAVGKSLKGKSIDEWNVALDKLKHSKPIDVEDGVKDAFACIKLSYDYLRNKEARMLFLMCSMFPEDHDISVEDLFRYGIGLGLCGEVDSFELARSQMNAGINNLLSSCLLMCSERKKDHLKMHDVARDVALWIAHKEGFPIHVNLEKNMSMLSDDGAFKDCYAVSSYYEEIEQLPHHLDSPKLEILILNTSWSLRSSRASFEGIKGLKVMAITAVNYFKIAYLSLPQSTWSLNNLRTLRLVEWHLDDISSVDLLRRAEDVYLGCHQGACKNIIPELVQAVGGMNELTKLRLDACSEIECVIDTSSYSFQVDAVYPKLVKLVLENMENLSEVIRGPSLVYFFENLEELHLTHCIQLHSIFSKECNLCSLKVLKLEHCPTLITSLFPMSVAQTMVLLQELTVKNCHELKCLVTNEGEEIIPDNSGFLFPKLRNLSVSSCQKLEFTFPISCVQGLEQLQEISIVNASKLKYVFGHHGHEGQLSNQTEISFPLLSILRLEGLPNLVSIFPENNPSRWPSLTELHWGQGALETGKNQLSNEVLLPIVLEVREVEIQNCAVVNIFHLERVEQVMESKLETLRLTNLPELKSIWMGCSSTQILTLQYLQHLEVHHCGKLKSIFSSMIYTFSIPLLTNLIISDCEELEEIIAENEEPQNLVNSQICFPKLRELQVLQCNKLKRLFSTVVARMLPNLKFLSIVEAAELLVVFKRKNGECTNSQDKIELPNLRKIQLKKLPNLIEFCQEEVLLPTLRIVELTSLPSLTEFCQGFRLSSVKLHKVVIEGCPKLNSISEQSQLIALPQRTKGEQTNRPSGSKLRNKASALLPDDLNVHHLVIENCLAINLFYPEGVESVSSKLVSLRLRNLPKMRLIWMDCTHVVSLHGLQELSVYNCGKLKSVFSTVLQRSLPQLMHLSISHCKDLKEIIAEDDDTQNPLNSQVCFPKLESLRVEKCHKLKRVFPTSMETMLPQLESLSMSDCDQLKEIFGCGNIEGSSFDKRKEVVLPNLRHVNLQQLPNLSDICKGCTLHVVQLKRLMVMGCDKLRSVFFTTVETMLPQLGFLDISNCAQLKEILGCGNIEDSSISNRKEIILPNLRKLSLHQLPNLIDICQGFILHAVELNDVSIRDCPKFTPILGATSVCQTKERCSDGEVAHEIQALQAILNLNEGEEAGITSILTLYHISKLYRFLRPLFSSSSPRLPLFCHLSPTNLRRCSVTPAPLLNGSPYYSVQPMLAACGGLPSPCFCREFKSESFVSFFYPPFRFLFPSSRVAEVGAYEGDASSFELRPPSF 1630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4144 1630 Gene3D Ribonuclease Inhibitor 758 1045 IPR032675 -
Sto5g4144 1630 Gene3D - 305 390 IPR042197 -
Sto5g4144 1630 SUPERFAMILY RNI-like 917 1135 - -
Sto5g4144 1630 Coils Coil 37 57 - -
Sto5g4144 1630 Gene3D - 391 478 IPR036388 -
Sto5g4144 1630 PRINTS Disease resistance protein signature 173 188 - -
Sto5g4144 1630 PRINTS Disease resistance protein signature 247 261 - -
Sto5g4144 1630 PRINTS Disease resistance protein signature 340 354 - -
Sto5g4144 1630 PRINTS Disease resistance protein signature 710 726 - -
Sto5g4144 1630 SUPERFAMILY RNI-like 1194 1473 - -
Sto5g4144 1630 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 768 998 - -
Sto5g4144 1630 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 8 586 - -
Sto5g4144 1630 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1359 1460 - -
Sto5g4144 1630 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 999 1274 - -
Sto5g4144 1630 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1280 1327 - -
Sto5g4144 1630 Pfam NB-ARC domain 161 393 IPR002182 GO:0043531
Sto5g4144 1630 Gene3D Ribonuclease Inhibitor 1157 1331 IPR032675 -
Sto5g4144 1630 Gene3D Ribonuclease Inhibitor 1343 1487 IPR032675 -
Sto5g4144 1630 Gene3D Ribonuclease Inhibitor 506 757 IPR032675 -
Sto5g4144 1630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 407 IPR027417 -
Sto5g4144 1630 SMART AAA_5 170 326 IPR003593 -
Sto5g4144 1630 Coils Coil 69 93 - -
Sto5g4144 1630 Gene3D - 144 302 IPR027417 -
Sto5g4144 1630 SUPERFAMILY RNI-like 572 809 - -
Sto5g4144 1630 CDD AAA 176 286 - -
Sto5g4144 1630 PANTHER - 8 586 - -
Sto5g4144 1630 PANTHER - 1280 1327 - -
Sto5g4144 1630 PANTHER - 1359 1460 - -
Sto5g4144 1630 PANTHER - 999 1274 - -
Sto5g4144 1630 PANTHER - 768 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4144 Sto-Chr5 50200208 50214692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4144 174 484 WRKY Transcription Factor Family AT5G45050 27.445 7.92e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4144 - - aprc:113857454 806.594