Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4138 ATGACAGAGGTCATACTATCATTCATAGCCAAGGTTGCCGAATACTTAGTTGAACCCACCGTACGTGAAGGACGTTATCTGTTTTGTGGAAGCAAAATCACAAGAAATCTTGAATCTGAAAAGCAGAAGCTGAAATCTGCTCTAGAGAGTGTGCAAAAGCTTGTTGAAGAAGCACACTGCAGAGTTGAAACAATTGATGATGCAGTAAGCAAGTGGCTCAAGGAAGTAGAGAATCTCATAGGAGAGGTGGAGAAGCTTCAACAAGAAAAGCAGGAAAGCAAGGCTTGCTTTCATGGGTGGTGCCCTAGTCCAAACAAATATCGTTTATGCAAACAAATGGCAAAGAGAATAGAGACAGCCATAGGGTTAAATACAAGAAGACAATTCAACCCATTTTCCCGGTGTACTCCAATCCCAGATGTCTATTTTTcctctgaaaattttatttactttgagTCCACAAAAGTAGCTTCAGATAAGCTCTTGGAGGCATTAGGAGATGATGGTTGCTATATGATTGGATTGTACGGTATGGGGGGTTCTGGGAAAACAACCCTAGCAAAAGAAGTGGGGAAGGAGGCCAAAAAATCAAAGCTTTTTGACCATGTTGTATTTACGACCGTGTCCCAAACTCCTAATGTTAGAAAGATTCAAGGAGAAATTGCTGACTTGTTAAATGCGAAGTTGGATGAAGAAACAGAAGCTGGAAGGGCAAGACGAATAGCATTAAGGTTACAGAGTGGGGAACGGATTCTTGTGATATTGGATGATGTATGGACAAAGGTTAATTTGGAAGATATTGGGATTCCCCTTGATGGCAATAGAAAGAAATGCAAGGTTTTGCTAACCACACGGCGTTTGCAGCATGCGGATATCGATGATGTGAAGCAAGAAGTAGTGGCAAGAGAAGTTTCCAAGGAATGCAAAGGTTTACCAATTGCAATTGTGGCCATGGGGACTTGCTTAAAAGGAAAAGATCTTGATGAAATGAATGTAGTGTTGCATAAACTGAGGCATTCAAAACCACTTGATGTGGATGGAAATGAGAAAGACGCTTTCGCTTGCCTACGATTAAGCTATGATTATTTGAAAAGCGATGAAGCCAAGTTGCTTTTCTTGTTGTGTGCTATGTTCCCAGAAGATCATAAGATTGTTTTTGAAGATCTATTAAGGTATGGAATCGGATTGCGTACATGTGAAGGAGTGGATTCATTCGAAATGGCTAGGAGCCAGGTGAATGTTGCTATAAATAATCTTGTTGATTCTTGTTTGCTGATGCATGAGAATGACAAATTTGGCCAGAAGATATTTCTGAAGATGCATGATATGGTTCGTGATGTAGCATTGTGGATAGCATCCCAAGAGAATCATGCTATTATGGTAAACCATCGGAAGGGGCTAAGTTCATTGTCAAAGGATGGAACTTTGAAAGATTGTTATGCAGCAAGCTGTTGGAACACAGAACTAGATCAATTTTTTCGACAATTAGATGCTCCGAAGCTTGAGTTGCTATTGTTACATGTATCATATCAACACATTGATTTGGCATATGCATCATTTGAAGATTTGAAAGGGCTCAAGGTTTTGGCGATTGAGGGAGTGGAATTTGGCAGACTGAAGACAGCATTACCACGTTCAATCGACTCGTTGAGTAATCTTCACACTTTGCGATTGGTATTTAGAGAATTAGGTGACATCTCCTTTGTTGTAAACTTAACAAGTCTCGAGGTTCTAGACATTCGAGGTAGTAAATTCAATGGACTTCCAAATGGTTTAGAAAATTTGAAGAAACTGAAGTTGTTGGATTTGTCAAATTGCTTGATTGATGGGGGTTGCTATGAAGTAATACAAAGGTGCTTACAGCTACAAGAGTTGTATATGTGGGGGAATCAACTTACAGATTCTGATGCTTTTTGTCTTGATGATGTTACTTTCCCAAACTTGCAGAGGTATCAATTACAAGTGGGGGAATTGGCAGGACTTTCTGATGTTGTCACTTTTAGTAAAAGAGTTATGTGCTTCAAAGGTTTGAATATCTCCTTCTTAAACACAACTGCCAAGGATCTTCTCCAACGAGCAACTCAAGTTGTTCTGGAAGGACTTGACAGAGAATGCGAAAGTATCGTCCCGGATTTGGTTCAAGCTGTAGGAGGAATGCATGAGTTGACTGAGCTTTATCTTGAGTCTTGCTTAGAGATGGAATGTGTTTTCAATACAATTTCAATTGAATTGAATAACTCACTCCCCAATTTAGTCAAGTTGAACTTGTTCCAAATGGACAAGTTAAAAGAATTGTGTCTTGGTCCTACTTTGCATTGCATCTTCCAAAATTTAGAAACTGTGAAAGTTGATAGGTGCTTTCAGTTGTTAAGCATGTTTCCAAGGGATTGCAATTTGTGCAATCTCAAGTACTTGAAGATTGACAGTTGTTCAAAGTTGACAAACTTGTTCCCTATGTCTGTGGTGCCAACTCTACTATCTCTACAAGAGCTTCACATAGAATACTGTGATGAGTTGAAGCATATAATAACAAATGGAGGAGGGAATCAAATGCTTGCAGCACCAGACAATACTTTTCTCTTGGGATTCTCCCAATTGAGGAAACTATACATCCATGATTGTTACAGGTTAGAATATATGTTTCCAATCTCAGTGGTTCAAAGCCTTAAGCAATTGGAAGAGATATGGATAAGTGGTGCATCCAGTTTGAAATATGTGTTTAGTGATCTTGATTCTCAGTATCATTCATCGTATCAAAATGATGTCCAAATTGTGCTTCCTCACTTGAAAACAATCATATTGGGGTATCTCTGGAACCTTGTCAAAATTTTTCCAGAAAGGTATTACCTAAGTTCGAGTGGGAGCATCAATAACTCGGTTGGTTCAAAACAAGTACAAGAACATGCAAATAAGGAACAAGTTCTGAGTTTCCCACGTCTTCAATCCATAAACTTGAGAGAATGTAGAAAGTTAAAATGTGTCTTTCCTGCACTCATCCATAGAAGCCTACCAGAACTGACTGGGCTCTTCATGCATAATTGtgaggaattggaggaaatcTTTGAAGAGACTCAAGAACATGAGAATCCATGTAATGGTCAAGTATGTTTTCCAAAATTGGCAAAGTTGCATATCAAGAAGTGCAAGAAGTTGAAAACCGTTTTCTCTGTCGATGTGGCTAGAGTTCTCCCAAATTTGAGCTCTCTACGCATATCGAGGGCGGATGAACTGGTGGAGATTTTCAGACATACAGGTGAAGACAATTGTGACAATGATAAGGAGATCATGCTCCCAAAGTTGAGTGAGCTAAGACTAAAAAGATTGCCCAGTCTTGTTGATATTTGTGGAGGCTTCAATTTACATGCAGTGGAGCTTTGCAAGGTTCTGATATTTGAATGCCCCAAATTGGCTTCAATTTCAAGATCAAGTCGAATCAAATCATTCCACCACATAACAGAGGAACAGATTCTAAGTTTCCCACATCTTCAATCTATTGAACTGATAGAATGTGGACAACTGAGATTTGTGTTCTCTAGTGTTGTGCATACAATCCTACCAGAACTGACTAAGCTCCTCATATATAATTGTGATGAACTGGAGGAAATCTTcgaagaaaaagaggaaatgCAGAATCAGTGTAATGGTCAATTGTGTTTTCCAAAATTAGCACAATTGGATGTCAAGAAGTGCAATAAGCTGAAAACCATTTTCTCCATCAATATGGCTAGAGTTCTTCCTCAACTGAGCTCTCTATGCATATCAGAGGCCGATCGGCTAGTGGAGATTTTCAGACATAAAAGTGAAAACAAGTGTGACAATAATGATAGTGAAATCATGTTCCCAAAGTTAAGTAAGCTAACTCTGGAAAAATTGCCTAACCTCCTTGATATCTGTCAGGGATTCAACATAGAAGAAGAGGCAGTGGAGCTTTGTGAAATTGTCATACATGGATGCCCCAATTTGGCTTTTATTTCAAGACCAAGCCAAATGATATCATCCTATCAAAACATGGAGGGACTAGAGGCATATGGAAGAAATGGCAGGAATTTATGTTTGTATCATGAGATAGTTAATCCCATTGCCTCGAGATTAACAAAGTTATCGTTGGGAGATCTACCTGAGCTTAGGTTCATATGGATGGGTTCTACACACTTTCTGAGCCTCCAATGTCTTGAGGAATTAAAAGTATATAATTGTGGGAAATTGAAATCTCTTTTATCTGCCGTCGTCCAAAGAAGCCTACCACATTTAAGAAACCTAGTCATATCTGGGTGCGAGGAGTTAGAAGAAATTGTTGTTGAAAATGAAGAATCTTACTCTCTATCTGGTGATCAAGTGTGCTTCCCTAAACTACAGTATTTAAGTGTGGAGGGTTGCCCTAAGTTGAAAAGCCTTTTCTCTGCCATCATGGTAAGAATTATCCCACAAATAAGAAGTATAGAGATATCAAAATGTGCACAATTGGAAGAGATTTTTGGATGTGAAAATATGGAAGAGAGCAGCACCAACCACAGGAAAGAGATTGTGCTTCCAAACTTGACACATATAAGGCTTCAACATTTGCCTAGTTTGGTCGACATTTGCCGTGGGTTTAGTTTATACTGTGTGAAACTTGATATGGTGATGATAAATGAATGCCCCAAATTTACTCCATTTTTAGGAGCAAATCAAGTGATTTCTTCTGTTCATCAAAGTAAAGAGGTGTCACATGAAATCCAAGCTCTCCAAGCTATTCTAAATGTGGAAATGCAATTTCCTGTGGAAGAAGAATTACAAGGCTTGATCATGGTGTCAAATTTGGAAATATTAACTTTGGAGAATTTACCTGAGTTGGTTTTTATATGGAACGGTCCGACTCTGATAAGCTTCCAACATCTTAAACACTTGTACGTCAACGGATGCAGAAAGTTGAGGTGCATCTTCTCTGACACTGTCATTAGAAGCCTTCCACTATTGGAATATCTGGACATAAAGCAGTGTGAAGAGTTGGAGGAAATCATTTCATATCGTCTCCAACAATTCTGCCTCCCAAAATTGAGACATCTTACTGTTGTGGGATGCAACAGGTTGAGATGTGTTTGGCCTCTCTCCGTCTCGCCGTGTCCTCCACGTTTATGGAAACTCGAAATAAGAAGGTGCTCTCAACTGGAGCAAGTTTTTGGTTGCGCGCCTGAAGATCATCACGATGCACGCGTGATGGAGTTTCAGCTACCAAACTTGACTTGTATGACACTCCAAGAACTGCCTAGACTTGATAACTTGTGCAGAGGCTTTGAATCTCAGCTCAAGCTGAAGGATTTAAAACGATGTGAAGTGAAGGATTGTCCCAACTTATCCTCACTCGCCACCATTCCTGATCTCCACAAGTTTATGAGTCCAACTCAAATACAAATTGAGGTGCAAAAATCAACTTCAACTAGTATTGAACCAAAATTTTATCAGTAA 5445 0.3886 MTEVILSFIAKVAEYLVEPTVREGRYLFCGSKITRNLESEKQKLKSALESVQKLVEEAHCRVETIDDAVSKWLKEVENLIGEVEKLQQEKQESKACFHGWCPSPNKYRLCKQMAKRIETAIGLNTRRQFNPFSRCTPIPDVYFSSENFIYFESTKVASDKLLEALGDDGCYMIGLYGMGGSGKTTLAKEVGKEAKKSKLFDHVVFTTVSQTPNVRKIQGEIADLLNAKLDEETEAGRARRIALRLQSGERILVILDDVWTKVNLEDIGIPLDGNRKKCKVLLTTRRLQHADIDDVKQEVVAREVSKECKGLPIAIVAMGTCLKGKDLDEMNVVLHKLRHSKPLDVDGNEKDAFACLRLSYDYLKSDEAKLLFLLCAMFPEDHKIVFEDLLRYGIGLRTCEGVDSFEMARSQVNVAINNLVDSCLLMHENDKFGQKIFLKMHDMVRDVALWIASQENHAIMVNHRKGLSSLSKDGTLKDCYAASCWNTELDQFFRQLDAPKLELLLLHVSYQHIDLAYASFEDLKGLKVLAIEGVEFGRLKTALPRSIDSLSNLHTLRLVFRELGDISFVVNLTSLEVLDIRGSKFNGLPNGLENLKKLKLLDLSNCLIDGGCYEVIQRCLQLQELYMWGNQLTDSDAFCLDDVTFPNLQRYQLQVGELAGLSDVVTFSKRVMCFKGLNISFLNTTAKDLLQRATQVVLEGLDRECESIVPDLVQAVGGMHELTELYLESCLEMECVFNTISIELNNSLPNLVKLNLFQMDKLKELCLGPTLHCIFQNLETVKVDRCFQLLSMFPRDCNLCNLKYLKIDSCSKLTNLFPMSVVPTLLSLQELHIEYCDELKHIITNGGGNQMLAAPDNTFLLGFSQLRKLYIHDCYRLEYMFPISVVQSLKQLEEIWISGASSLKYVFSDLDSQYHSSYQNDVQIVLPHLKTIILGYLWNLVKIFPERYYLSSSGSINNSVGSKQVQEHANKEQVLSFPRLQSINLRECRKLKCVFPALIHRSLPELTGLFMHNCEELEEIFEETQEHENPCNGQVCFPKLAKLHIKKCKKLKTVFSVDVARVLPNLSSLRISRADELVEIFRHTGEDNCDNDKEIMLPKLSELRLKRLPSLVDICGGFNLHAVELCKVLIFECPKLASISRSSRIKSFHHITEEQILSFPHLQSIELIECGQLRFVFSSVVHTILPELTKLLIYNCDELEEIFEEKEEMQNQCNGQLCFPKLAQLDVKKCNKLKTIFSINMARVLPQLSSLCISEADRLVEIFRHKSENKCDNNDSEIMFPKLSKLTLEKLPNLLDICQGFNIEEEAVELCEIVIHGCPNLAFISRPSQMISSYQNMEGLEAYGRNGRNLCLYHEIVNPIASRLTKLSLGDLPELRFIWMGSTHFLSLQCLEELKVYNCGKLKSLLSAVVQRSLPHLRNLVISGCEELEEIVVENEESYSLSGDQVCFPKLQYLSVEGCPKLKSLFSAIMVRIIPQIRSIEISKCAQLEEIFGCENMEESSTNHRKEIVLPNLTHIRLQHLPSLVDICRGFSLYCVKLDMVMINECPKFTPFLGANQVISSVHQSKEVSHEIQALQAILNVEMQFPVEEELQGLIMVSNLEILTLENLPELVFIWNGPTLISFQHLKHLYVNGCRKLRCIFSDTVIRSLPLLEYLDIKQCEELEEIISYRLQQFCLPKLRHLTVVGCNRLRCVWPLSVSPCPPRLWKLEIRRCSQLEQVFGCAPEDHHDARVMEFQLPNLTCMTLQELPRLDNLCRGFESQLKLKDLKRCEVKDCPNLSSLATIPDLHKFMSPTQIQIEVQKSTSTSIEPKFYQ 1814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4138 1814 Pfam NB-ARC domain 159 287 IPR002182 GO:0043531
Sto5g4138 1814 Gene3D Ribonuclease Inhibitor 688 941 IPR032675 -
Sto5g4138 1814 Gene3D Ribonuclease Inhibitor 957 1213 IPR032675 -
Sto5g4138 1814 PANTHER - 863 1029 - -
Sto5g4138 1814 PANTHER - 1034 1212 - -
Sto5g4138 1814 PANTHER - 7 627 - -
Sto5g4138 1814 PANTHER - 1445 1668 - -
Sto5g4138 1814 PANTHER - 699 849 - -
Sto5g4138 1814 PANTHER - 1216 1437 - -
Sto5g4138 1814 SUPERFAMILY RNI-like 1596 1781 - -
Sto5g4138 1814 PRINTS Disease resistance protein signature 172 187 - -
Sto5g4138 1814 PRINTS Disease resistance protein signature 245 259 - -
Sto5g4138 1814 PRINTS Disease resistance protein signature 593 609 - -
Sto5g4138 1814 Gene3D - 355 449 IPR036388 -
Sto5g4138 1814 Gene3D Ribonuclease Inhibitor 1328 1507 IPR032675 -
Sto5g4138 1814 Gene3D Ribonuclease Inhibitor 1510 1730 IPR032675 -
Sto5g4138 1814 CDD AAA 175 293 - -
Sto5g4138 1814 ProSitePatterns Neurotransmitter-gated ion-channels signature. 786 800 IPR018000 -
Sto5g4138 1814 SUPERFAMILY RNI-like 1145 1492 - -
Sto5g4138 1814 SUPERFAMILY L domain-like 856 1124 - -
Sto5g4138 1814 SUPERFAMILY L domain-like 432 840 - -
Sto5g4138 1814 Gene3D Ribonuclease Inhibitor 458 687 IPR032675 -
Sto5g4138 1814 Coils Coil 34 61 - -
Sto5g4138 1814 Gene3D - 139 300 IPR027417 -
Sto5g4138 1814 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 863 1029 - -
Sto5g4138 1814 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1216 1437 - -
Sto5g4138 1814 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 7 627 - -
Sto5g4138 1814 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1034 1212 - -
Sto5g4138 1814 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1445 1668 - -
Sto5g4138 1814 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 699 849 - -
Sto5g4138 1814 Coils Coil 69 96 - -
Sto5g4138 1814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 375 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4138 Sto-Chr5 50140257 50147897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4138 173 758 WRKY Transcription Factor Family AT5G45050 23.913 8.93e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4138 - - lang:109341976 913.679