Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4135 ATGGCCACACAGGCTCTTGTGTCTTCTTCGTCTCTGACCTCTTCGGTGCAGGCTGCGAGGAAGATTTTGGGAGGAAGACCACTTCAATACCCTAATTCCTCCAGAAAAGCTTCTTTTGTCGTCAAGGCTGCTTCTACTCCACCCGTCAAGCAAGGAGCAGATAGACAATTGTGGTTTGCTTCAAAACAGAGCCTTACTTACTTGGATGGCagCCTTCCAGGTGACTTCGGATTTGACCCACTAGGACTCTCAGACCcagaaggcacaggagggttcATCGAGCCTAGATGGCTAGCATACGGCGAAATCATCAACGGTCGTTTCGCCATGTTAGGCGCAGCCGGAGCCATAGCACCCGAAATTCTCGGCAAACTAGGTCTAATCCCAGAAGAAACGGCACTCCCATGGTTCAAAACGGGAGTGATCCCACCCGCCGGTACCTACAACTACTGGGCCGACCCGTACACACTCTTCGTCCTCGAAATGGCCCTAATGGGCTTCGCGGAGCACAGGAGATTCCAAGACTGGGCCAAGCCCGGGTCCATGGGGAAACGCCCATTCTTTAACCCACTTGGGTTTGGGAAGGATGAGAAGTCAATGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGGAGATTGGCTATGTTGGCTATATTGGGGTACTTTGTACAAGGTCTTGTGACTGGTGTGGGACCCTACCAGAACCTTCTAGATCATTTGGCTGACCCTGTGAACAACAATGTGTTGACCAGCCTCAAGTTTCACTGA 768 0.4961 MATQALVSSSSLTSSVQAARKILGGRPLQYPNSSRKASFVVKAASTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKLGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKRPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4135 255 Gene3D Chlorophyll a/b binding protein domain 56 254 - -
Sto5g4135 255 Pfam Chlorophyll A-B binding protein 66 224 IPR022796 -
Sto5g4135 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 186 254 - -
Sto5g4135 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 186 - -
Sto5g4135 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 186 IPR001344 GO:0009765|GO:0016020
Sto5g4135 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 186 254 IPR001344 GO:0009765|GO:0016020
Sto5g4135 255 SUPERFAMILY Chlorophyll a-b binding protein 54 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4135 Sto-Chr5 50127957 50130483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4135 19 255 Chloroplast and Mitochondria Gene Families AT1G61520 80.545 6.89e-149 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4135 K08909 - zju:107416800 461.84