Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4111 ATGGCTTCCGCAGCCACACCCAAGCTCGTCACTCAAGAAGTGAATGCATTGAAAGAGATAGGGACGAAGCTGGGGAAGAAGGATTGGGACTTCGGTGTAGATCCTTGTAGTGGAAAAGGCAAATGGAATGTCTCTGATGTTAGAAAAGGCTTTCAAAGCTCTGTGACCTGTGATTGCTCCTTCAACCTCAATTCTTCTTGCCATGTTGTGAGCATATTCTTGAAGGCTCAGAATCTTTCTGGCACTCTACCACCAGAGTTTTCCAAGTTTCAGTATCTCAAGCAATTGGACCTTAGCCGCAACATCTTCACTGGTACTGTACCTCAGCAATGGGCTACCATGCAATTGGTGGAGCTCTCTTTTATGGGAAACAATTTATCAGGTCCTTTTCCAAAAGTTCTCACCAATATTACAACCCTCAGAAACCTGAGTATCGAAGGAAACCTGTTTTCAGGCCCGATTCCTCCAGAGATTGGGAAATTGATCAATTTACAAAAAATCATTCTATCATCAAATGCATTCACAGGAGAATTGCCAGTGGCACTTTCAAAGTTGACCAACTTGAATGATTTGAGGTTAAGTGACAATAATTTCTCAGGGAGGATACCTGAATTCATTAGCAAATGGACATCAATTGAAAAACTGCACATAGAGGGCTGCTCACTTGAGGGCCCCATCCCTTCTAGCATTTCTGCCTTGACAAGCTTAACTGATTTgAGGATAACTGACCTAAAAGGTAGAGGCTCCTCTTTCCCACCACTGAGTAATATGGAATCAATGAAGACACTGATACTGAGGAAATGCTTGATTAAAGGAAAGATCCCCAACTATGTTGGGACTATGAAAAAACTGAAAGTGCTAGACTTGAGTTTCAATGACTTGATTGGAGAGATACCTGCTTCTTTTTCCCAACTCGAAAAAGTAGACTTCATGTATCTTACTGGGAACAAGCTAGGAGGGACTATACCTAATTGGGTCCTTGGAAGAAATAGAAACGTTGATATGTCATACAATAACTTCAGTTGGGAGAGCTCAAGTCCAGTTGAATGTCCACGAGGGAGTGCaAACTTAGTGGAAAGCTACTCTTCTTCTGTGGATAAACGAAGCAATGTTCATGCATGCTTGAAAAGGAACTTTCCATGCTCTACTTTGGGAAACCAACATTACTCCTTGCACATAAACTGTGGTGGTAAAGAGGCAAATATTAGTGGTACTATTTATGAAGGTGACAGAGAACAAAGAGGCACTGCAATGTATTACTCTGGTAGGAATTGGGCTCTCAGCAGCACAGGAAACTTCATGGACAATGATATTGAGTCTGATTCCTATATTGTGACCAACACATCTAAACTTGTCAATGTCTCGGTCCTCAATTCCGGACTATACACAACAGCTCGTCTTTCTCCCCTTTCTCTAACATATTATGGACTCTGTCTCATGAATGGAAACTACACTGTTAAGCTCCACTTTGCAGAGATCATATTTATAAATGATAGATCATTTAACAGTCTTGGGAGGCGCATATTTGATGTCTACATCCAGGGGAAGTTGGTCCTGAAGGACTTCAATATAGAGAAAGAAGCTGGTGGAATTGGTAAGCCCATTGTGAAGATATTTAATGCTACTGTCGTGCAACATACTTTGAAGATTCAGTTTTACTATGCGGGGAAGGGGACGACCGGCATACCCACAAGAGGAATATATGGACCTCTAATATCTGCTATATCAGTAGAACCTAATTTTAAACCTCCATCAAGGGATCGAACGAGAATTTATGTTATAGTTGCAGTTGGCGTAGTAGCTGCTGTTGTGCTACTTGTCCTTATTGTCATAGGCATCATGAGGAGAAATGGCTGGTTAGGAGGCAAGGACTCAGTGTATAAAGAGCTTAGAGGTATAGATCTGCAGACAGGATTATTCACGTTAAGACAAATCAAAACAGCTACCAAAAACTTTGATGCTACTAATAAAATTGGAGAAGGTGGCTTTGGTTCTGTTTACAAGGGTCTACTATCAGATGGTACTGTAATTGCAGTAAAGCAGCTCTCCTCAAAGTCTAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTACGGATGTTGTGTGGAGGGGAACCAGTTAATAGTGATCTATGAGTATATGGAAAATAATTGTCTATCACGTGCACTTTTCGGAAAGGATTCAGCATGCAAAGTAAAACTGGATTGGAAAACCAGGAAGAAAATCTGCCTTGATATAGCTAGAGCTTTGGCTTTTCTCCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACCAGTAATGTGTTGCTAGACAAGGAGTTTAATGCTAAAGTTTCGGATTTTGGTTTGGCAAAACTTAATGAAGATGACAATACCCATATCAGCACTCGAGTTGCAGGAACCATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGCTATTTGACAGATAAAGCAGATGTTTATAGCTTTGGGGTGGTTGTATTGGAAACCATCAGTGGAAAGAGCAATACAAATTACAGGCCCAATGAAGACTTTGTTTATCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGAAGTCTATTGGAGCTGGTTGATCCAGATTTGGGTTCAGAATATTCAACTGAGGAGGCCATGGTCATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCCACACTTAGGCCAACAATGTCCCAGGCTGTAAGCATGCTTGAAGGTCGGACCGACATCCAAGACTTGCTCTCGGATCCCGGATATTCGGCAAATAGTTCCAAATACAAGGCCATAAGGAACCACTTCTGGCAAAATCCGAGCCGAACACAAAGCTTGTCGAGACGTACTCTATATACTGATTCCTCTAATTCGTACCTTGAGACCGAAGCAAGCTACCACCATCTTGTAACCGTGAACTCGGATGAATCAGAAAAGTGA 2991 0.4152 MASAATPKLVTQEVNALKEIGTKLGKKDWDFGVDPCSGKGKWNVSDVRKGFQSSVTCDCSFNLNSSCHVVSIFLKAQNLSGTLPPEFSKFQYLKQLDLSRNIFTGTVPQQWATMQLVELSFMGNNLSGPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGKLINLQKIILSSNAFTGELPVALSKLTNLNDLRLSDNNFSGRIPEFISKWTSIEKLHIEGCSLEGPIPSSISALTSLTDLRITDLKGRGSSFPPLSNMESMKTLILRKCLIKGKIPNYVGTMKKLKVLDLSFNDLIGEIPASFSQLEKVDFMYLTGNKLGGTIPNWVLGRNRNVDMSYNNFSWESSSPVECPRGSANLVESYSSSVDKRSNVHACLKRNFPCSTLGNQHYSLHINCGGKEANISGTIYEGDREQRGTAMYYSGRNWALSSTGNFMDNDIESDSYIVTNTSKLVNVSVLNSGLYTTARLSPLSLTYYGLCLMNGNYTVKLHFAEIIFINDRSFNSLGRRIFDVYIQGKLVLKDFNIEKEAGGIGKPIVKIFNATVVQHTLKIQFYYAGKGTTGIPTRGIYGPLISAISVEPNFKPPSRDRTRIYVIVAVGVVAAVVLLVLIVIGIMRRNGWLGGKDSVYKELRGIDLQTGLFTLRQIKTATKNFDATNKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLIVIYEYMENNCLSRALFGKDSACKVKLDWKTRKKICLDIARALAFLHEESRIKIIHRDIKTSNVLLDKEFNAKVSDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVVLETISGKSNTNYRPNEDFVYLLDWAYVLQERGSLLELVDPDLGSEYSTEEAMVMLNVALLCTNASPTLRPTMSQAVSMLEGRTDIQDLLSDPGYSANSSKYKAIRNHFWQNPSRTQSLSRRTLYTDSSNSYLETEASYHHLVTVNSDESEK 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4111 996 Gene3D Ribonuclease Inhibitor 138 207 IPR032675 -
Sto5g4111 996 Gene3D Ribonuclease Inhibitor 15 137 IPR032675 -
Sto5g4111 996 SUPERFAMILY L domain-like 56 341 - -
Sto5g4111 996 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Sto5g4111 996 Gene3D Phosphorylase Kinase; domain 1 623 727 - -
Sto5g4111 996 Pfam Malectin domain 390 575 IPR021720 -
Sto5g4111 996 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 50 962 - -
Sto5g4111 996 Pfam Protein tyrosine and serine/threonine kinase 655 922 IPR001245 GO:0004672|GO:0006468
Sto5g4111 996 Gene3D Ribonuclease Inhibitor 208 350 IPR032675 -
Sto5g4111 996 Gene3D Transferase(Phosphotransferase) domain 1 728 936 - -
Sto5g4111 996 Gene3D - 386 580 - -
Sto5g4111 996 SMART serkin_6 652 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4111 996 ProSiteProfiles Protein kinase domain profile. 652 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g4111 996 SUPERFAMILY Protein kinase-like (PK-like) 636 947 IPR011009 -
Sto5g4111 996 CDD STKc_IRAK 658 926 - -
Sto5g4111 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 50 962 - -
Sto5g4111 996 Pfam Leucine rich repeat 260 318 IPR001611 GO:0005515
Sto5g4111 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4111 Sto-Chr5 49896816 49910709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4111 191 980 Receptor kinase-like Gene Family AT1G07650 66.916 0.0 1050
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto5g4111 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4111 - - vun:114195543 1578.92