Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4106 ATGGACATTGCACTCTCTGTTGTAACTGATATTGTGAGTAAGTTAGTAGATACAGCAATACGCCAAGCTCGTTATTCTTTCCAGTTCAACAAGTATGTTAATgatcttgaaaaagaaaaagcgaACTtgcaattaaaaatagaaagtacTATTGGCCGTGCTCAAGAAGCTAAGAAGAAAACTGAAAAGACTGTTAGTGTGGTTGATGATTGGTTGAGTAAAGCAGACTCTCTCATGGCACAAGTGTTGGAAATGGAAGAAAAggcaaataaaagaaacaaggtATCTTGTCTTAAGTGTTGCCCCAACTGGGTTAGCCGTTATGGTTTAGCCAAAAAGATTGAAGAGAAAATCAATGAAATTATAGAGCACAAGGAAAAAGATTTTCCTGAGTTTTCTCGACTTGCTACACTCATAGGCATGAACTATTTTTCTTCGGAAGCTTTTGTACACTTCAATAGTAGAAAGGTGGCTTGTGATGGACTTTTGGAGGCACTAAAAAATGATAAGGTTCGCATGATTGGATTGTGGGGAATGGGTGGGTGTGGTAAGACAACCTTGGTAAAAGAAGTGAGTAAAGAAGCAGAGAAATTTTTTGACAAAGTTGTCTTTGTTACTGTGTCTAATACCATTCAGGTTCGAAATATTCAAGGTAAAACTGCAAGCCAACTGGGTTTAAAAttagaagaggaagaggaaacaGAGAGAGCTAGACGGTTGTTCATGAGATTGAATGGTGGAGAAAGGTTTCTCATAATTTTGGATGATGTATGGGAAATGCTTGATTTTGAGGCCATAGGAATTCCTGTaggtgaaaataaaaatggatgcACTGTTCTTATAACTACACGAGAACTCCGTGTTTGTACTTTGATGAATTGTCAAAGTATAATTGGCCTTGAAATCTTGAATATGGAAGAAGCATTGACTCTATTTCAAAAGCATGCAAAATTATTTGATGAAAACTCTGAAACCAAGAAGTTGAAGGTTTTGGCAGAGAACATTACAAAAGAATGTGGTGGTTTACCGGTTGCAATTGCTGCTGTGGCTAGCTCTTTGAGGGGGAAAACTCAAGCTGAGTGGGTTGAAGCATTGGAGACATTAAGAGATTGTAGTCCAGTGGATATTGGAGAAGGTTTAAAAAATCCTTATACATGTCTTCGACTAAGCTATGATAATCTAAAGAATGAGGTAGCTAAATCACTCTTTCTGTTGTGTTCTGTGTTTCCAGAAGATTATGAAATTGACATTGATGATTTAGCTATATTTGGCATAGCGCTAGGATTGATCGGAGAAATCCACTCTTTGAAAAGGGCAAGGAACCAAGTGAGTATTTCCATAAATAAGCTTGTAGATTCTTGTTTGCTGTTGGGAGATAAAGAAAAAGGTGTCATTAGCATGCATGACTTGGTTCGTGATGTGGCCTTATGGATAGCAAAAAACGAGAATAAGATGATTATGGGACCAGAAAGGAGTCAAAAGGTGTTAAAAGTGGATATGATTTTAAAGGACAATTCCATAAGATATTTGTGGCTTGAGGGAGTTGATAAATTTCCTCATGAGTTGGATTGTCCAAACCTGGAGTTTCTTCGTATTTCCATAAAGTCAAAGCATGGTAAGTATGTAGCAAATGAGTTTTTGAATGGACTCAAGAAACTTAGAGTTTTGTTTCTTGAGCATCAATCTTCTGATAAAGAACAAGTCCTAGAATTGCCCGAGTCAATCCATTCGATAAATAATCTTCGTTACTTATTGTTGGATGGGTGGATATTAGGAGACATCTCTTTGTTAGGAGGCTTAGAAAGACTTGTATCTCTGACATTAAGGTATTGTTCCTTCGATGAATTACCAAAAAGCATATCAGAACAAAAGAATTTGAGATTGTTACATATCTCAGATTGTGAGATTAAGAGAAATCCTTATGAAGTGATTGGAAGATGTTCACAATTGGAAGAATTGTATTTTTATGATAACAGTGGAGAAGAATGGGAGGATAAAGGGGAAAATGTTGTTGAATTCTTTGATAAAAATTGTTCTACACTTGCATTGGAAAGGTACATTGTTGTTATTGGGAAGCTTTATTACGAAGAAGTTCGTTCGACTATAACAAGAGTTGTATCTGTGGGAGATTTTGAGAGTTGCATCTCAAATGAAACAATTAGGGATCTAATGCAAAGagctcattctctttctttggAAAGAATCCATAGTTGTAAAACGATTGTCCCTGACATTGTTGAAAGAATAGGAGGGGATATGAATGAATTGACCGTACTTGAACTCTATGATTCAGATGAGATAGAGTATGTGATAGATATTCCTAATCATTCGGCTTTGGGTCTTGTTAGAATCATCTCTAATTTGACACAACTAGAAATATCAGGATTGAAGAATTTAAAAACCTTGTGCAATGGTCGTCCTCCTCATGGCCTTTTTGCAAATTTGGAGATTCTAATGGTACGTGAATGCAATTCCCTTGAGCATATTATAACAGATGAAGTGGAGGAGATAGTTGAAGATGACAATGAATATCAAAGGAACTATActcttgcattcccaaatttgAAACTGATTGATATCATTGAGTGCAATCAACTGGAATACATAGTCCCAATCTCTTATACTCTGAGCTTGCCAAAATTGAACGTTTTAACAATAGATGGTGCTGCTAAATTGAAGAATATATTTGGGCAATGCAATTATAAAGATCAGAATCCAAATGAGTTTCAGAGCATTGAATTGTTGGCTTTAAGAGAGCTAACACTCTATGACTTGCCAAATATCATCAGCATTTGTGCAGAAAATTATCATCCAAGATGGCCTTCTTTGGAAAGATTGTACTTGAGGAATTGTCCACAATTAACCACCATGTCTGTGAGCAATCATAGCATCCCCCACTCTGGATTGACACAACAACATACAGCAGCAAAGGATGGAAAGGAAATACATATGGAGAAGTTGAAAGAAATCGTACTGGTAGGCTTTAACATAGATGTTCTTTTCTATGTCGAAGGACCAGAAATGAACTCAGTCTTACAACGGCTTAGATTGGAAGATCTACATGAGTTAAGGCATATATGGATAGGTCCTAAAAACGTATTACAACTTCAAAATCTTGGTATTTTGACAATTACGAAATGTGAAATTTTGAAAGTTGTCTTCCCTGCAACCATTTCAAGAAGCCTTCCACAGTTAAGGAAGCTGATCATCATGGATTGTAAGGAATTGGTGGAAATCatcgaagaagaagaaaatcaaaatgTGTCAATTCCCCAACTTGTCTTCCCAAATATAGGCACAATCATCATCAGACATTGCCCTAAGTTGAAACGTGTATTTCCTGTGTGCACATCTCGTGCACTTCCAAAATTAAAGGCCTTGTATATAGAAGAAGCGTCCCAACTAGAGCAAGTATTTGGAAACGAAGCACAAGAAAAAATGGAAGGTGTGATGATTCCAAATTTGGAATATGTAGTACTTATGAAGCTGCCAAGACTCAAGATGGGGCCCCAATGGATTGGGTTGCAAACTGTGAGATACCGTCTTGTGCAAGATTCTCAATACATCAATTTCACTTCCACTGTTGCTACTCTTGAGGAATTGCGTAAAATATGCAAAACTGAGATAGATGACGAGTATGATGAGGATGTCTGGGAATTAAAGTATAATTTGAAAAAGATTATTCAATCCAATGAAGATTCTAGTGAAGAAATCACTAAACAAATTGAAAGCAAGGGAACTCATGGAGTTGAAGCAGCTTCAGAGATTGTGGATATTTCTTCACAAGTTGAAACTAATCAAAATAATAGTGGCACCCAGTTAGAGCAGAAATTGACACCCAATCAAAACAAAGCAACAAAGGAGTGTACTGGAGAAATGCCTGGTTTAGAACCTGTAGTTATGACAACATCATCAACAAATCCTTTGGAGTTGGTGGATGAAATATCAACAAGTAAACCAAGTTTGGTAGGCCAAAAACAGCCACTTGCAGAAAATGAAATTCCTCTAGCAACTAAAAGTGTTAACAAGCTAGAAGAACCAAGTGTTGAAGAGGGAAATATATCAGAGAATAAGAGTGTTAAAAGATTTACTGAAGGTTCTATATTGAAGAATGCTGAGATAGTTACTTCATCAGCTCCTTCAGAGCCAACAAGCTTATTCCCTAGTCCATTAGTTACTACTTTTTCCAAAGCAGTACTTATACAAAGGCAAATCAAGGTCAACCAAACTGAAGTAAACATTGACAAAGATATAGAGGCCAAACCTTCAATAAATCTTGAAGACAATGATCTAATTAGCTTGTTTCAATTTCaggaggaagaagatggtgGTCAATTGTCAATACCATCTATTCCTATTGTTGCTGCTATAGGAAACGACCTTGTGGGAAAGGCCCTTGCAGACTTGGAAGTCTCCTTGAAGATGCCTCTTAAGGACATAGCAACCTCAGAGGACAATAGTCTTCGCGTTCTGACAACTCTCAACTTCTTGTCTCGCCTTTCCGTTGAAGATGGAGCATTATTACCCCAAGGACTCAAAGGTATAATAAAGTCTCTGCACCAAGAATTGCCAAGCATTCTATATTCTTTCAAGCCAGCTTTAGCTATGATCAACAAATTTCATGAAGCTCAAGAGAAGGAAGCTAGGCTGATGGATCAGATCTCTATGTGGGAGAAAGAAATAGAGGATTGTGAGGCTAAGCTATCGTCTCTTCAAGAGCAAAAGAAGACATGTGTTGCAGAAGCTACAGAATTCAACAAAGAGTATGAGAGTGTGATGAAAGAAAATGTTGAAATGGTGGAAGATCAAAGAAAAGCTtggcaaaaattgtttgatgtTGATTATAAATGGTCAATTCTGTATAGTCAATTTCAGAAAAACAATATCGATGTGCATACCCGTCGAATAATACATTCCACGTTTGAAAATGTAATTGAAAACAAAGAAGATTCTGGATTTCAAAACTTGGCACTTGTTGCTGCACCGAACTTGACTGAGAGTCTCAATGAAACAACAATTGGCTTAGAGATACCTGCAGccatggaaacttcacatgaaACTGAGTTGGTGGATAGAAGATCAGCTATTGAACCAAGTTTGACAGATCAACAACAGCCACTTGGAGAATTTGAAACTGCTAATAATGAATTTTCTCATGAAACTAAAAGTGATATCACGGTAGAAGATGAAGACCAAAGTGCTAAAGAGGGAAATATATCAGAGGAAACGAGTATTGTTAAAGGAAATATTGAAGAAGGTTCTTCATCAAAGAATGCTGAAGCACTTCCACATAGTCAACTGAATATCAATCAATCAGTTGCTATTGCTGGTACCACCAAAGATGAACTTGTGAGAAAGGCCATTTCAGACATGGAAGTTTCTCTGAAGATGCCTCTTAAGGATATAGCAACCTCAAAGGCCAATAGCCTCCGTCTTCTAACCGCTCTTAACTTCTTGTCTTGCCTTTCCTGGGATGAGGGAGCTCTACCTCATGGACTTAAAGCTATAATAGACTCTTTGCACCAAGATTTGCCAAGTATTCTGTGTTCTTTTAAGTCATCCTTTGCTAAAATCAACAAATTTCCCAAGTTAAAGGAACATATCTCTAAGCTGGAGAACGAAATAAAAGATTGTGACAAGAAGTTATTGTCTgttgaagagaaaaagaagaaatatgtTGCAGAAACCGTAGAGTTGAAGAAAGAGTTTGAGAGTGTTAGAAAAGACAAGTCTGAAATAATGGAGGAACATCAAAGAAAGGCTCAACAACATATATTTCAGGATAATTATAGATGGTCATTCTTATGTAGCCAATTTCAGTTGAACAACATTGATGCTAGAATTCTTGattggagaagaagaagaagaagaagaagcgttCAAGCTTTGTGCTCAAATTGCATAGAAACACTAAAAcagATTGCTTCCTCTGTTGTGGCTGAGATTGTGAGCAAGTTAGTGGATGAAGCATACTCTCTCATGGAAAGAGTGGTGGAGCTGGAAGAAAATGCtaagaagagaaggaagaaatCTTGTCTTAAGTACTGCCCTAATTGGATTAGACGTTATGGTCTAGCCAAACAGCTTGAAGAGAAGATCAGTGAAATTGCAAAAGAATGTTGTGGTTTACCGGTTGCAATTGCTGCCGTGGCTAGCACTTTGAAGAACAAGACTCATGATGAATGGACGGAAGCATTGGAAACACTATAA 6210 0.3544 MDIALSVVTDIVSKLVDTAIRQARYSFQFNKYVNDLEKEKANLQLKIESTIGRAQEAKKKTEKTVSVVDDWLSKADSLMAQVLEMEEKANKRNKVSCLKCCPNWVSRYGLAKKIEEKINEIIEHKEKDFPEFSRLATLIGMNYFSSEAFVHFNSRKVACDGLLEALKNDKVRMIGLWGMGGCGKTTLVKEVSKEAEKFFDKVVFVTVSNTIQVRNIQGKTASQLGLKLEEEEETERARRLFMRLNGGERFLIILDDVWEMLDFEAIGIPVGENKNGCTVLITTRELRVCTLMNCQSIIGLEILNMEEALTLFQKHAKLFDENSETKKLKVLAENITKECGGLPVAIAAVASSLRGKTQAEWVEALETLRDCSPVDIGEGLKNPYTCLRLSYDNLKNEVAKSLFLLCSVFPEDYEIDIDDLAIFGIALGLIGEIHSLKRARNQVSISINKLVDSCLLLGDKEKGVISMHDLVRDVALWIAKNENKMIMGPERSQKVLKVDMILKDNSIRYLWLEGVDKFPHELDCPNLEFLRISIKSKHGKYVANEFLNGLKKLRVLFLEHQSSDKEQVLELPESIHSINNLRYLLLDGWILGDISLLGGLERLVSLTLRYCSFDELPKSISEQKNLRLLHISDCEIKRNPYEVIGRCSQLEELYFYDNSGEEWEDKGENVVEFFDKNCSTLALERYIVVIGKLYYEEVRSTITRVVSVGDFESCISNETIRDLMQRAHSLSLERIHSCKTIVPDIVERIGGDMNELTVLELYDSDEIEYVIDIPNHSALGLVRIISNLTQLEISGLKNLKTLCNGRPPHGLFANLEILMVRECNSLEHIITDEVEEIVEDDNEYQRNYTLAFPNLKLIDIIECNQLEYIVPISYTLSLPKLNVLTIDGAAKLKNIFGQCNYKDQNPNEFQSIELLALRELTLYDLPNIISICAENYHPRWPSLERLYLRNCPQLTTMSVSNHSIPHSGLTQQHTAAKDGKEIHMEKLKEIVLVGFNIDVLFYVEGPEMNSVLQRLRLEDLHELRHIWIGPKNVLQLQNLGILTITKCEILKVVFPATISRSLPQLRKLIIMDCKELVEIIEEEENQNVSIPQLVFPNIGTIIIRHCPKLKRVFPVCTSRALPKLKALYIEEASQLEQVFGNEAQEKMEGVMIPNLEYVVLMKLPRLKMGPQWIGLQTVRYRLVQDSQYINFTSTVATLEELRKICKTEIDDEYDEDVWELKYNLKKIIQSNEDSSEEITKQIESKGTHGVEAASEIVDISSQVETNQNNSGTQLEQKLTPNQNKATKECTGEMPGLEPVVMTTSSTNPLELVDEISTSKPSLVGQKQPLAENEIPLATKSVNKLEEPSVEEGNISENKSVKRFTEGSILKNAEIVTSSAPSEPTSLFPSPLVTTFSKAVLIQRQIKVNQTEVNIDKDIEAKPSINLEDNDLISLFQFQEEEDGGQLSIPSIPIVAAIGNDLVGKALADLEVSLKMPLKDIATSEDNSLRVLTTLNFLSRLSVEDGALLPQGLKGIIKSLHQELPSILYSFKPALAMINKFHEAQEKEARLMDQISMWEKEIEDCEAKLSSLQEQKKTCVAEATEFNKEYESVMKENVEMVEDQRKAWQKLFDVDYKWSILYSQFQKNNIDVHTRRIIHSTFENVIENKEDSGFQNLALVAAPNLTESLNETTIGLEIPAAMETSHETELVDRRSAIEPSLTDQQQPLGEFETANNEFSHETKSDITVEDEDQSAKEGNISEETSIVKGNIEEGSSSKNAEALPHSQLNINQSVAIAGTTKDELVRKAISDMEVSLKMPLKDIATSKANSLRLLTALNFLSCLSWDEGALPHGLKAIIDSLHQDLPSILCSFKSSFAKINKFPKLKEHISKLENEIKDCDKKLLSVEEKKKKYVAETVELKKEFESVRKDKSEIMEEHQRKAQQHIFQDNYRWSFLCSQFQLNNIDARILDWRRRRRRRSVQALCSNCIETLKQIASSVVAEIVSKLVDEAYSLMERVVELEENAKKRRKKSCLKYCPNWIRRYGLAKQLEEKISEIAKECCGLPVAIAAVASTLKNKTHDEWTEALETL 2069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4106 2069 PANTHER - 6 1087 - -
Sto5g4106 2069 MobiDBLite consensus disorder prediction 1265 1288 - -
Sto5g4106 2069 MobiDBLite consensus disorder prediction 1715 1737 - -
Sto5g4106 2069 Coils Coil 68 88 - -
Sto5g4106 2069 MobiDBLite consensus disorder prediction 1713 1758 - -
Sto5g4106 2069 SUPERFAMILY RNI-like 984 1136 - -
Sto5g4106 2069 SUPERFAMILY L domain-like 467 1110 - -
Sto5g4106 2069 SMART AAA_5 170 304 IPR003593 -
Sto5g4106 2069 Gene3D - 391 476 IPR036388 -
Sto5g4106 2069 Gene3D Ribonuclease Inhibitor 847 986 IPR032675 -
Sto5g4106 2069 Gene3D Ribonuclease Inhibitor 987 1178 IPR032675 -
Sto5g4106 2069 Coils Coil 1861 1888 - -
Sto5g4106 2069 Gene3D - 144 298 IPR027417 -
Sto5g4106 2069 Gene3D - 302 390 IPR042197 -
Sto5g4106 2069 Gene3D - 1989 2069 IPR042197 -
Sto5g4106 2069 Gene3D Ribonuclease Inhibitor 498 846 IPR032675 -
Sto5g4106 2069 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 6 1087 - -
Sto5g4106 2069 MobiDBLite consensus disorder prediction 1738 1758 - -
Sto5g4106 2069 Pfam NB-ARC domain 162 392 IPR002182 GO:0043531
Sto5g4106 2069 PRINTS Disease resistance protein signature 173 188 - -
Sto5g4106 2069 PRINTS Disease resistance protein signature 244 258 - -
Sto5g4106 2069 PRINTS Disease resistance protein signature 339 353 - -
Sto5g4106 2069 PRINTS Disease resistance protein signature 850 866 - -
Sto5g4106 2069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 406 IPR027417 -
Sto5g4106 2069 Coils Coil 1540 1581 - -
Sto5g4106 2069 Coils Coil 1983 2003 - -
Sto5g4106 2069 MobiDBLite consensus disorder prediction 1265 1297 - -
Sto5g4106 2069 CDD AAA 162 283 - -
Sto5g4106 2069 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4106 Sto-Chr5 49801294 49812092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4106 171 504 WRKY Transcription Factor Family AT5G45050 26.254 7.13e-14 75.9