Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4104 ATGGATTCCGAAAATTCTGATGTTTCGAAGGCTGAAGAATTCAAACTTCGCGCCAATGAAGCATTTAATGCTCGCAAATATGCCCAAGCTATTGATCTATACACACAAGCAATAGAAGTAAACAGCCGAAATGCTGTATACTGGGCTAATCGTGCCTTTGCCCATCTTAGGCTTGAAGAATATGGTAGCGCAATACAAGATGCTACGAAGGCTATTGAAGTTGACCCTAAATATTCGAAGGGTTACTACAGGCGAGGTGCTGCTCATCTTGCCATGGGGAAATTCAAGGAAGCACTGAAGGATTTTCAGCAGATGAAAGAATTTATCTGTGTGGTCAAGAAAATGTGCCCAAATGATCCTGATGCAACCAAGAAACTGAAGGAATGTGAAAAAGCAGTTATGAAACTTAAATTTGAAGAAGCAATTTCTACACCAGGTTCAGAAAGGCGTCCAATAGCTGAAACCATAGATTTCCGTTCTATAGTAGGAGGTGACCGGTCAGGCAGAAAGGGCCACAATTCTTTTGTGCCCACCGAAGTGGCCATAGCAGCAGTGACTGTAGCAGTTATGGCAGCGGTAGTGATGTTGTTCAGGACATCAGCGACCACAATGGTAGCTGCAGTTGTGGTTGGTCTGCTGTTGCTCCTTGGGGCATATTGGTGGAGTAACTACAATTCTGATGTGGAGCCACAATATTCAGGAGCAAGAATAGAGGGGGACGTTGTTACTTtagattttgtgaaaaaaatGATGGATGATTTCAAGAATCAGAAGTGCCTACATAAACGATATGCCTTCCAAATTGTATTGCAAACAAAAGAGATGCTGCAAGCTTTGCCGTCTCTTGTTGATATAAATGTTCCTAATGGAAAACATTTTACTGTTTGTGGTGATGTGCACGGTCagTACTATGATCTGTTAAATATCTTTGAACTTAATGGGCTTCCCTCGGAAGAGAATCCGTACCTTTTTAATGGTGACTTTGTAGATAGAGGATCTTTCTCTCTGGAAGTTATCCTGACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCCATATATCTAGCTAGAGGGAACCATGAGAGCAAGAGCATGAacaagatttatggttttgagGGTGAAGTTCGCTCAAAGTTAAGTGAGACATTCGTGGAACTATTTGCAGAAGTATTCTGCTGTTTACCTTTGGCTCACGTGATAAATGAGAAGGTTTTCGTGGTTCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAGCTCTCTGACATTAGAGCAATTAACCGGTTTTGTGAGCCTCCAGAAGAAGGATTGATGTGTGAATTGCTATGGAGTGATCCACAGCCTCTCCCTGGAAGAGGCCCAAGCAAGCGCGGTGTAGGTCTTTCTTTTGGCGGAGATGTGACAAAAAGGTTTTTGCAGGAAAATAATTTAGGTATGTTTGCTATTGGTTTGTCGTGCGATCCCATGAAGTAA 1470 0.415 MDSENSDVSKAEEFKLRANEAFNARKYAQAIDLYTQAIEVNSRNAVYWANRAFAHLRLEEYGSAIQDATKAIEVDPKYSKGYYRRGAAHLAMGKFKEALKDFQQMKEFICVVKKMCPNDPDATKKLKECEKAVMKLKFEEAISTPGSERRPIAETIDFRSIVGGDRSGRKGHNSFVPTEVAIAAVTVAVMAAVVMLFRTSATTMVAAVVVGLLLLLGAYWWSNYNSDVEPQYSGARIEGDVVTLDFVKKMMDDFKNQKCLHKRYAFQIVLQTKEMLQALPSLVDINVPNGKHFTVCGDVHGQYYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLSETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSDIRAINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLQENNLGMFAIGLSCDPMK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4104 489 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Sto5g4104 489 PIRSF PPPtase_5 1 481 - -
Sto5g4104 489 Gene3D - 220 488 IPR029052 -
Sto5g4104 489 SMART pp2a_7 260 489 IPR006186 GO:0016787
Sto5g4104 489 SUPERFAMILY Metallo-dependent phosphatases 241 479 IPR029052 -
Sto5g4104 489 PANTHER BNAC09G39960D PROTEIN 226 478 - -
Sto5g4104 489 PANTHER BNAC09G39960D PROTEIN 11 162 - -
Sto5g4104 489 SUPERFAMILY TPR-like 8 143 IPR011990 GO:0005515
Sto5g4104 489 SMART tpr_5 11 44 IPR019734 GO:0005515
Sto5g4104 489 SMART tpr_5 45 78 IPR019734 GO:0005515
Sto5g4104 489 SMART tpr_5 79 119 IPR019734 GO:0005515
Sto5g4104 489 Pfam Calcineurin-like phosphoesterase 292 479 IPR004843 GO:0016787
Sto5g4104 489 PRINTS Serine/threonine phosphatase family signature 292 319 IPR006186 GO:0016787
Sto5g4104 489 PRINTS Serine/threonine phosphatase family signature 322 349 IPR006186 GO:0016787
Sto5g4104 489 PRINTS Serine/threonine phosphatase family signature 355 379 IPR006186 GO:0016787
Sto5g4104 489 PRINTS Serine/threonine phosphatase family signature 389 415 IPR006186 GO:0016787
Sto5g4104 489 PRINTS Serine/threonine phosphatase family signature 419 446 IPR006186 GO:0016787
Sto5g4104 489 Pfam Tetratricopeptide repeat 47 77 IPR019734 GO:0005515
Sto5g4104 489 Gene3D Tetratricopeptide repeat domain 2 159 IPR011990 GO:0005515
Sto5g4104 489 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 226 478 - -
Sto5g4104 489 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 11 162 - -
Sto5g4104 489 Pfam PPP5 TPR repeat region 226 284 IPR013235 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4104 Sto-Chr5 49781552 49788440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4104 267 476 Calmodulin-binding Proteins AT5G63870 34.286 1.17e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4104 K04460 - gmx:100820099 806.208