Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4099 ATGAGAACTGTTCTCAAGGTTGTAGATAACTCTGGGGCTAAAAAGGTGATGTGCATACAAGCCTTGAAAGGGAAAAAAGGGGCAAGATTAGGTGACACAATAGTAGCATCAGTGAAAGAAGCACATCCTAATGGAAAGGTAAAGAAAGGGAAGGTTGTGTACGGTGTGGTTGTACGCGCCGCCATGCAACGGGGGCGATGTGACGGCAGCGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTGGACAAGCAAGGGCTGCCGATAGGGACCAGAGTTTTTGGTCCTGTACCTCATGAACTGAGGATGAAGAAGCATGTCAAGATTCTTACTTTGGCAGGGCATATTGCCTAA 354 0.4718 MRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGLPIGTRVFGPVPHELRMKKHVKILTLAGHIA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4099 117 SUPERFAMILY Ribosomal protein L14 2 116 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sto5g4099 117 SMART Ribosomal_L14_2 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto5g4099 117 Gene3D Ribosomal protein L14 1 117 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sto5g4099 117 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 1 117 - -
Sto5g4099 117 Pfam Ribosomal protein L14p/L23e 1 116 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto5g4099 117 Hamap 50S ribosomal protein L14 [rplN]. 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto5g4099 117 ProSitePatterns Ribosomal protein L14 signature. 55 81 IPR019972 -
Sto5g4099 117 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto5g4099 117 TIGRFAM rplN_bact: ribosomal protein uL14 2 116 IPR005745 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4099 Sto-Chr5 49751553 49751906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4099 9 100 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 1.47e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4099 K02874 - jre:109005836 210.305