Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4073 ATGTTAGAAAAGATGGAACAAAAGCAAGAACATGGCATTGATGTTACACTAATGTCTCCCCCCATTGTCCCCAAAGTAGTCTCACCAATTTCATTCGTGGCCGAGGGCGAAACCCTTCGTCGTCGGCCTCGAGGCCGGCCAGCCGGCTCCAGAAACAAGCCGAAGCCGCCAATTATTGTGACGAGGGACAGTGTTAATGCTCTTAGAGCTCATGCCATGGAAGTAAGTTCCaattgtgatgtgaatgaaagtCTATTAAACTTTGCAAGGAAGAAGCAACGTGGCATCTGCATACTTAGTGGCACTGGTCATGTAACCAATGTAACCCTACGCCAATCGGCCTCCTCCGGCTCGACCGTGACCCTCCATGGACGGTTCGAGATTCTCTCGCTTCTTGGGTCAATATTGCCCCCGCCGGCTCCACCTAAGATCACGGGACTCACAATTTACTTGACTGGTACTCAAGGGCAAGTTGTGGGTGGGGAAGTGGTGGGTGCTTTGATGGCTTCAGGCCTTGTAGTTATAACGGCTACATCATTCATGAACACCACTTTCGATCGCCTTCCATTGgataaagatgatgatgaaattgCTACTACAATGCAAAACCAGAATGATTTTTATGGGATGCCTCAGAACTTGGCCACAAATAGTTCAATTCACCCTGAGACATACTCTTGGGCACCACCAAGGAGAAACTTGTCAAAAACATGA 714 0.4622 MLEKMEQKQEHGIDVTLMSPPIVPKVVSPISFVAEGETLRRRPRGRPAGSRNKPKPPIIVTRDSVNALRAHAMEVSSNCDVNESLLNFARKKQRGICILSGTGHVTNVTLRQSASSGSTVTLHGRFEILSLLGSILPPPAPPKITGLTIYLTGTQGQVVGGEVVGALMASGLVVITATSFMNTTFDRLPLDKDDDEIATTMQNQNDFYGMPQNLATNSSIHPETYSWAPPRRNLSKT 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4073 237 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 181 IPR005175 -
Sto5g4073 237 MobiDBLite consensus disorder prediction 37 57 - -
Sto5g4073 237 SUPERFAMILY AF0104/ALDC/Ptd012-like 65 192 - -
Sto5g4073 237 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 21 236 - -
Sto5g4073 237 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 236 IPR014476 GO:0003680
Sto5g4073 237 CDD DUF296 69 153 IPR005175 -
Sto5g4073 237 Gene3D - 68 202 - -
Sto5g4073 237 ProSiteProfiles PPC domain profile profile. 65 205 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4073 Sto-Chr5 49428644 49429423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4073 23 236 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 63.556 2.91e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4073 - - jre:118347723 298.13