Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4058 ATGGTTTTGAAGGTTTTTCTCGTTCTGGTTCTCTTTGGGATGTATTCTTGCGCTTTGGTGGAGGTGAAGGGCATTTCTGGGAATTTCAATCTCAACAGAAATGGGTCTTCTCTTGCTGCAGTCAAAATGCCTGATCATCCGAGCTTCAATGTGGTCTCTTCTTCTGCAAATACTGATTGTAGCTTCTTGGAGTCTAGGAAATTTGGGCTTTCTGAAGCAACCATGGCATCAGATGGAAAGATTGTTGATGGAGATGGTGAACCACACAAGCAATTGGTTAAACTCGATTTGAAACACAGGTCGGCGAGTGAAGATGGTAAGGCTAAAGAATCTGTGATTGATTTCACAGTGAGGGACTTGACCAGAATTCATACCCTGCATCGGAGGGTCATAGAGAAGAAGAACCGAAACACCATTTCTAGGCTGCAGAAAGCACAGGAAGACTTAAAGAAGAAGCCATACAAGCCAATtgcttctccggcaccggcacCAGCAGCTCTGACGCCGGAATATTTCGCAAATGGGTATTCCAGCCAGCTTGTTGCCACGCTGGAATCAGGGGTTAGTCTTGGCTCTGGAGAGTACTTCATGGATGTGTTTGTGGGTACACCTCCTAAACATTTCTCTCTGATAATTGATACTGGTAGTGATCTTAACTGGATTCAATGTGCTCCTTGTTATGCTTGTTTTGATCAAAATGGACCTTACTATGATCCTAAAGATTCCAGTTCTTTTAAGAACATAAGCTGCCATGATCAAAGATGCCAATTAGTTTCATCCCCAGATCCGCCTCAACCTTGTAAGTCCGAAAACCAAAGCTGCCCTTACTTCTACTGGTATGGAGATAGCTCCAACACAACTGGGGACTTTTCGCTTGAGACTTTCACGGTTAACCTCACCACGATAGCGACTGGGAAGTCTGAGCTTAGGCGTGTGGAGAATGTAATGTTTGGGTGTGGACACTGGAATAGAGGCCTCTTCCATGGAGCTGCTGGATTGCTAGGACTAGGGAGAGGGCCACTCTCATTTGCTTCTCAGCTGCAATCTCTATATGGTCATTCCTTTTCGTATTGTCTCGTTGACCGGAACAGTAACATTAGCAGCAAACTGATATTTGGTGAAGACAAGCATCTTCTGAGTCTTCCCAACTTGAATTTCACTTCATTTGTGGGTGGAAAAGATTCGAAAGAGAACCCAGTTGATACATTTTACTAtgtgcaaataaaatcaatcatGGTTGATGGTGAGGTACTGAAAATACCAGAAGAGACTTGGAATGTGTCAGCAGAAGGAGGAGGTGGAACAATCATTGATTCCGGCACTACTCTAACTTATTTTGCAGATCCTGCTTATGAGATTATCAAGGAAACATTCATTGAGAAAATCAAGGGCTACCCAATTGTTGACGGCTTTTCTCCATTAAACCCATGCTACAATGTTTCTGGACATGAAGATGATGTGGAGCTGCCTGATTTCAGGATTGTGTTTGCAGACGGAGCCGTGTGGAACTTCCCGGTCGAAAATTACTTCATCCAGGTCGAACCGGGCGATGTCGTCTGTTTGGCGATTCTCGGGACTCCTCGGTCGGCTCTTTCCATTATCGGAAACTATCAGCATCAAAACTTCCATATCCTCTATGATATGAAGAACTACAGACTAGGATATGCACCTGTGAATTGTGCTGATTTGATGTGTTTATTTAAAATGCTGATGAGTttgtgttgtgttgtgtgtgtgtgtgtgtgggaacAGTTTCACCAGTACCAGGTAGTGGGAAGAGCTCTTCCCACTGAAACCGATGAGCATCCCAAGATCTACCGGATGAAGCTCTGGGCCACCAATGAGGTCCGTGCTAAATCCAAGTTCTGGTATTTCTTGAGAAAGCTGAAGAAGGTCAAGAAAAGCAATGGTCAAGTGTTAGCCATCAATGAGATTTTTGAGAAGAACCCTACCAAGATTAAGAACTATGGAATTTGGCTGCGATATCAGAGCCGAACTGGTTATCACAACATGTACAAGGAATACCGAGACACCACTCTCAACGGTGGCGTCGAACAGATGTACAACGAAATGGCATCGCGTCACCGTGTGAGGTTTCCTTGCATCCAGATCATCAAGACTGCCACCATCCCTGCAAAGATGTGCAAAAGAGAGAGCACCAAGCAGTTCCACAACTCTAAGATCAAGTTCCCTTTGGTGTTCAAGAAGGTTAGGCCACCAACTAGGAAGCTGAAGACAACCTATAAGGCATCCAGGCCCAACATGTTTATGTGA 2274 0.4301 MVLKVFLVLVLFGMYSCALVEVKGISGNFNLNRNGSSLAAVKMPDHPSFNVVSSSANTDCSFLESRKFGLSEATMASDGKIVDGDGEPHKQLVKLDLKHRSASEDGKAKESVIDFTVRDLTRIHTLHRRVIEKKNRNTISRLQKAQEDLKKKPYKPIASPAPAPAALTPEYFANGYSSQLVATLESGVSLGSGEYFMDVFVGTPPKHFSLIIDTGSDLNWIQCAPCYACFDQNGPYYDPKDSSSFKNISCHDQRCQLVSSPDPPQPCKSENQSCPYFYWYGDSSNTTGDFSLETFTVNLTTIATGKSELRRVENVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLQSLYGHSFSYCLVDRNSNISSKLIFGEDKHLLSLPNLNFTSFVGGKDSKENPVDTFYYVQIKSIMVDGEVLKIPEETWNVSAEGGGGTIIDSGTTLTYFADPAYEIIKETFIEKIKGYPIVDGFSPLNPCYNVSGHEDDVELPDFRIVFADGAVWNFPVENYFIQVEPGDVVCLAILGTPRSALSIIGNYQHQNFHILYDMKNYRLGYAPVNCADLMCLFKMLMSLCCVVCVCVWEQFHQYQVVGRALPTETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYNEMASRHRVRFPCIQIIKTATIPAKMCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNMFM 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4058 757 Gene3D Acid Proteases 375 565 IPR021109 -
Sto5g4058 757 PANTHER ASPARTYL PROTEASES 9 562 IPR001461 GO:0004190|GO:0006508
Sto5g4058 757 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 586 707 IPR023573 GO:0003735|GO:0005840|GO:0006412
Sto5g4058 757 ProSiteProfiles Peptidase family A1 domain profile. 195 556 IPR033121 -
Sto5g4058 757 SUPERFAMILY RplX-like 650 725 - -
Sto5g4058 757 CDD pepsin_A_like_plant 194 560 IPR034161 -
Sto5g4058 757 Gene3D Acid Proteases 174 374 IPR021109 -
Sto5g4058 757 Pfam Xylanase inhibitor C-terminal 404 556 IPR032799 -
Sto5g4058 757 Gene3D - 579 650 - -
Sto5g4058 757 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Sto5g4058 757 SUPERFAMILY Acid proteases 187 563 IPR021109 -
Sto5g4058 757 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 9 562 - -
Sto5g4058 757 Coils Coil 128 148 - -
Sto5g4058 757 Hamap 50S ribosomal protein L18Ae [rpl18a]. 585 648 IPR028877 -
Sto5g4058 757 Pfam Xylanase inhibitor N-terminal 195 373 IPR032861 -
Sto5g4058 757 PRINTS Pepsin (A1) aspartic protease family signature 201 221 IPR001461 GO:0004190|GO:0006508
Sto5g4058 757 PRINTS Pepsin (A1) aspartic protease family signature 435 446 IPR001461 GO:0004190|GO:0006508
Sto5g4058 757 PRINTS Pepsin (A1) aspartic protease family signature 532 547 IPR001461 GO:0004190|GO:0006508
Sto5g4058 757 Gene3D - 651 726 - -
Sto5g4058 757 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 210 221 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4058 Sto-Chr5 49204475 49211365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g4058 584 757 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 90.230 1.52e-113 341