Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3989 ATGAATCAATCAAGTCCCTCTGATCTAGTGTTCACAGTGAAGAGGAGGCAACCAGAATTAGTGGCTCCTGCTAAGCCTACTCCTCGTGAATTTAAACTACTTTCCGACATAGATGACCAAGATGGATTTCGTTTACAAATTCCACTTGTTCATTTTTACCCTTCCCACCCTTCCATGGTAGGCAAGGACCCTGCTCATGTCATCAAAACGGCACTCGCTCACGCCTTGGTATTTTACTACCCATTTGCAGGTCGACTCCGCGAAGGTCATGCCCGCAAACTCATGGTGGATTGTAGTGCACAAGGCGTACTATTCGTCGAGGCCGATGCCGATGTCACACTTTCCCAATTCGGCCATCTTCAACCTCCATTTCCATGCTTCCAACAACTCCTTTATAAAGTCCCTAGTTCAGAAGGAATGATTGATTGTCCTCTCTTACATATTCAGGTTACACGCCTCAAGTGCGGGGGTTTCATCTTCGCCCTCCAAATGAACCACACCATGTGTGACGGTCCAGGTGTTGTCCAATTCCTGAAAGCCTTAGCCAAGATTGCCCGTGGTGCTTCTGAACCTTCTATTCAACCAGTGTGGCTTAGGAAACTCCTAAATGCAAGAGACCCACCCCGTGTTACATGCACCCATTACGAATACCAGCAAGTAGCAGTGCCACCTCATGATGATATAGAAGAGACCCAGGACATGGTTCAACGATCTTTCTTCTTCGGGCCCACTCAGATAGCAGCCATCCGTCAATCACTTCCTCATCACCTTCGTGATGGATGCACAAAGTTTGAACTCCTCACGGCATTCCTCTGGCGTTGTCGTACCATAGCCTTGCAACTAGAACCAATCGACGCCGTTCGCTTAATGTGTGTGATCAACGCGCGTGGGAAGAAAACCCTGGGTGGGTTGGAGATACCGGAGGGTTATTATGGGAACGCCATTGTATTTCCTGCTGTTGTAACCACTGCAGGGAAGCTAATTGGAGAGAATAATTCAATTGGGTATGCGTTAGAGATTGTGAAGAGAATAAAGAGTGAGATGAGTGAGGAGTATGTGCAGTCTGTGGCAGATCTGATGGTGATACGAGGGCGGCCATGCTTCACTAAGGCAAGGTCGTGGATTGTGTCAAATTTAGAACATGTTGGGTTTAGAGATGTGGATTTTGGGTGGGGGAAGGCGGTTTTTGCTGGAATAGCCAAGGCCGGAGCTGGTGGCTTTCCTGGAGTAAGCTTTTACGTTTCATGTGAGAATGCAGAAGGGGAGGAAGGTATTGTGATATGCATTTGCTTGCCTTCCAAAGCTATGGAAAGGTTCGTCAAAGAGATGGATGGCATGCTTGAGAAGCCTTTCATGCACTCTTCGTTATAG 1371 0.4763 MNQSSPSDLVFTVKRRQPELVAPAKPTPREFKLLSDIDDQDGFRLQIPLVHFYPSHPSMVGKDPAHVIKTALAHALVFYYPFAGRLREGHARKLMVDCSAQGVLFVEADADVTLSQFGHLQPPFPCFQQLLYKVPSSEGMIDCPLLHIQVTRLKCGGFIFALQMNHTMCDGPGVVQFLKALAKIARGASEPSIQPVWLRKLLNARDPPRVTCTHYEYQQVAVPPHDDIEETQDMVQRSFFFGPTQIAAIRQSLPHHLRDGCTKFELLTAFLWRCRTIALQLEPIDAVRLMCVINARGKKTLGGLEIPEGYYGNAIVFPAVVTTAGKLIGENNSIGYALEIVKRIKSEMSEEYVQSVADLMVIRGRPCFTKARSWIVSNLEHVGFRDVDFGWGKAVFAGIAKAGAGGFPGVSFYVSCENAEGEEGIVICICLPSKAMERFVKEMDGMLEKPFMHSSL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3989 456 Pfam Transferase family 13 444 - -
Sto5g3989 456 Gene3D - 231 448 IPR023213 -
Sto5g3989 456 PANTHER ALCOHOL ACYLTRANSFERASE 11 448 - -
Sto5g3989 456 Gene3D - 12 219 IPR023213 -
Sto5g3989 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3989 Sto-Chr5 48523823 48526325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3989 13 441 Monolignol Biosynthesis Gene Families AT5G48930 29.372 3.04e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3989 K19861 - ag:AAU06226 541.962