Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3952 ATGAGGCTCTCTTCATCTGGACTAGGTCAACCGGCTCAAGAAGGGGAGAAAAAATGTTTGAATTCTGAACTATGGCATGCATGTGCTGGTCCTCTGGTATCTTTGCCTGCTGTTGGAAGTCGTGTAGTCTACTTTCCACAAGGACACAGTGAGCAGGTTGCCGCTTCAACAAATAAGGAAGTAGATGCACATATTCCCAATTACCCTAACTTGCCACCACAGCTTATTTGTCAGCTTCACAATGTGACAATGCATGCAGATGTGGAAACAGATGAAGTATATGCTCAAATGACTCTGCAACCTTTAAGTCCGCAAGCAAAAGGATATGTATCTACTGCCTGCAGAATTGGGTACCCCAGCAAACAACCAACCAACTACTTCTGTAAAACATTAACTGCAAGTGATACCAGTACTCATGGAGGATTCTCTGTTCCTCGAAGAGCAGCTGAAAAAGTTTTCCCTCCTCTTGATTACACACAGCAGCCTCCTGCACAAGAACTAATTGCTAGGGATCTTCATGATAATGAATGGAAATTCAGACATATTTTTCGAGGGTTGAGTCCTCTGCTTTACCAGCCACAAGTAGAACTCTCTTGTTCTCTTACTGCCCAGCCATTCGACTGCTTGAAAGCAAATTCAAGTGATGCATATTGTGCAGCAGAAATGGTAAAAGGCCAAGAATGGTGGTTGAATCATTGGAATTGTCGCAAATCACTATTTATTGCTGAATTGCATGAATCTGGTAGTTGA 750 0.428 MRLSSSGLGQPAQEGEKKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQAKGYVSTACRIGYPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGLSPLLYQPQVELSCSLTAQPFDCLKANSSDAYCAAEMVKGQEWWLNHWNCRKSLFIAELHESGS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3952 249 SUPERFAMILY DNA-binding pseudobarrel domain 118 185 IPR015300 -
Sto5g3952 249 PANTHER AUXIN RESPONSE FACTOR 6 1 185 - -
Sto5g3952 249 Gene3D - 125 242 IPR015300 -
Sto5g3952 249 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 185 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sto5g3952 249 CDD B3_DNA 126 191 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3952 Sto-Chr5 48229602 48232634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3952 1 185 B3 DNA Binding Superfamily AT1G30330 83.957 1.59e-105 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3952 - - tss:122649862 343.969