Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3930 TTGACCCTAAAGAAGCAAGCTTCAATCTTGCTTTCTCTCAAAAAAGGCTTTGAAAATCCCCAAAATTCCTCTCTTCTTCAAACATGGGATGCCTCAAACTACTTGTCCCTTTGTTCATGGGAAGGTATCAAGTGTGACAATAACAACCATAGCCTCGTGGACATCTCGGTGGCCGGAAACGGCCTCTCCGGGGAGTTCCCACTGGAGATCCTCCGCCGGCTGCCGCGCCTGAGATCCCTCAACATATCCAACAACATGTTCACTGGGAATTTGAGCATCTGGGAGGAATCTTCCCAGCTTGAGGTCCTTGATGCCTATGACAACAACTTCAATGGCTCACTCCCTTTTGTCACCTACCTCCCAAGCCTCAAGCATTTGAATTTTGGCGGGAACTACTTTTCCGGGAAAATCCCAGAAAGTTATGGGAAAATGGTGGGGTTGGAGTTCTTGTTCCTTGCAGGGAATGATCTCAATGGGTTCATACCAAAAGAGCTTGGGAATCTCACTAACTTGACCCATTTGTACTTGGGATACTTCAACAAGTTTGATGGTGGGATCCCAAGTGAGATTGGGAGTTTGGTGAATCTGGTGCATTTGGACCTTGCAAATTGTGGGTTGAAAGGCACAATCCCTTCAGAATTAGGGAAGCTTGAGAATTTAGACACACTTTTCTTGCAAACCAATCAGCTGAGTGGCCCAATCCCTCCAGAGTTAGGCAATCTGAGGAAGTTGAGAACTCTTGACCTCTCCAACAATGAGTTtaaaggagaaatcccaaatGAATTTTCAAACCTCCTTGAGCTCACACTCATCCACCTCTTCATCAACAAATTGCATGGTGAGATCCCACACTTCATCTCTGAGCTCCCAAAGCTTGAGACTTTGAATCTATGGCAGAACAACTTCACTGGTTCCATCCCTCCAAAGCTAGGCCAGAATGGGAAGCTTAAACAACTTGATCTCTCAAGTAATAAACTCACTGGGTTGATCCCAAAATCTCTCTGCCTTGGGAGGAGCCTCAAGATCTTGATTTTGCTCAACAACTTCCTCTTTGGATCATTGCCTGAGGATCTTGGGAAATGCTTCACACTGGAAAGAGTTCGTTTGGGTCAGAATTACTTGACAGGAAAGATACCAAATGGGTTTCTTTACCTTCCTCAAATCTCACTTCTTGAGCTTCAAAACAACTATCTCACTGGTTTCCTTCCTCACCAAGATTCTTCCTCAGCTTCTTCTTCAAAATTAGGCCAATTGAATCTCTCAAACAATCGCCTATCTGGGAATCTCCCAGGATCAATTGGGAATTTCCCAAATTTGCAAACTTTGCTCCTAAGTGGGAACAAATTCTCAGGCCAAATCCCACCAGAAATAGGGAGGTTGAAGAATCTGCTGAAGCTAGACTTAAGCAGGAACAACATCTCAGGTAGTGTCCCTCCACAGATAGGACACTGTGTCCTACTCACATACCTAGACTTAAGCCAGAACCAACTCTCAGGTCCTATCCCACTTGAAATCTCCCAAATCCACATCCTAAATTACCTTAATCTCTCAAGGAACAACCTTAACCAAACCATCCCAAAAGAGATAGCCACCATGAAAGGCCTAACCTCAGCAGATTTCTCCCACAACAACTTCTCTGGTTCAATCCCTGAGGTTGGGTTATTCCTAGTCTTGAACTCCACTTTCTTTCAGGGAAACCCAAATCTATGTGGGtattACCCATGTGAGAAAACCCACTCTTCAACCTCAATTTCTAATGGAAGAAACGCCTCAAAATCCAATGGGGTTCCTGGGAAGTACAAGCTTGGTTTTGCTATAGCATTGTTAGGTTGTTCTCTGGTTTTTGCAGCATTGGCTATCATCAAGAGCAAGAAGAAAGCAAGGAGGAAGAATTCCCACCATCACTCATGGAAGATCACAGCTTTTCAGAAGCTAGAATATGGGAGTGAAGAAATCTTGGGGTGTATAAAGGAGAGCAATGTGATAGGAAGAGGAGGAGCTGGGATAGTGTACAGAGGGACCATGGCTAATGGTGAGGAGCTAGCAGTGAAAAAGTTATTAGGAATCACCACCAACAAAAGCACttcttctcatcatcatcagaatattaaATGCTACTTTCATTTCAACAACAGGTACATAGTGAGGCTTCTGGCTTTTGTGTCAAATAGAGAGACCAATTTGCTTGTGTATGAGTACATGCCAAATGGGAGCTTGGGAGAAGTGCTTCATGGGAGAAGAGGGGAGTCCTTGAAGTGGGAAACTAGGCTCAAGATTGCCATTGAAGCAGCCAAGGGACTCTGCTACTTGCACCATGACTGTTCACCTCTCATCATACATAGGGATGTGAAGTCAAATAATATACTTCTCAACTCTGAGTTTGAAGCTCATGTGGCTGATTTTGGACTGGCTAAGTTCTTGCATGACACTGGGGCTTCAGAGTGCATGTCTTCCATTGCTGGATCTTATGGCTACATTGCTCCagAGTATGCATACACATTGAAAGTGGACGAAAAGAGCGACGTATATAGCTTCGGAGTGGTGCTGCTGGAGCTGATCACCGGAAGAAGGCCGGTGGGCGATTTCGGGGAAGAAGGGCTAGACATTGTTCAATGGACAAAGATACAAACCAATTGGAGCAAAGAGAAGGTGGTGAAGATCCTTGATGAGAGGATTCACAATAATATCCCATTAGATGAAGCCAAGCAAGTGTTCTTTGTGGCCATGCTTTGTGTCCAAGAACATAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTTTCACAAGCAAAACAACCTAACACATTTCAAATGCAATGA 2826 0.4384 LTLKKQASILLSLKKGFENPQNSSLLQTWDASNYLSLCSWEGIKCDNNNHSLVDISVAGNGLSGEFPLEILRRLPRLRSLNISNNMFTGNLSIWEESSQLEVLDAYDNNFNGSLPFVTYLPSLKHLNFGGNYFSGKIPESYGKMVGLEFLFLAGNDLNGFIPKELGNLTNLTHLYLGYFNKFDGGIPSEIGSLVNLVHLDLANCGLKGTIPSELGKLENLDTLFLQTNQLSGPIPPELGNLRKLRTLDLSNNEFKGEIPNEFSNLLELTLIHLFINKLHGEIPHFISELPKLETLNLWQNNFTGSIPPKLGQNGKLKQLDLSSNKLTGLIPKSLCLGRSLKILILLNNFLFGSLPEDLGKCFTLERVRLGQNYLTGKIPNGFLYLPQISLLELQNNYLTGFLPHQDSSSASSSKLGQLNLSNNRLSGNLPGSIGNFPNLQTLLLSGNKFSGQIPPEIGRLKNLLKLDLSRNNISGSVPPQIGHCVLLTYLDLSQNQLSGPIPLEISQIHILNYLNLSRNNLNQTIPKEIATMKGLTSADFSHNNFSGSIPEVGLFLVLNSTFFQGNPNLCGYYPCEKTHSSTSISNGRNASKSNGVPGKYKLGFAIALLGCSLVFAALAIIKSKKKARRKNSHHHSWKITAFQKLEYGSEEILGCIKESNVIGRGGAGIVYRGTMANGEELAVKKLLGITTNKSTSSHHHQNIKCYFHFNNRYIVRLLAFVSNRETNLLVYEYMPNGSLGEVLHGRRGESLKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLHDTGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKIQTNWSKEKVVKILDERIHNNIPLDEAKQVFFVAMLCVQEHSVERPTMREVVEMLSQAKQPNTFQMQ 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3930 941 Gene3D Ribonuclease Inhibitor 263 582 IPR032675 -
Sto5g3930 941 Gene3D Ribonuclease Inhibitor 160 262 IPR032675 -
Sto5g3930 941 SUPERFAMILY Outer arm dynein light chain 1 34 140 - -
Sto5g3930 941 Pfam Protein tyrosine and serine/threonine kinase 658 929 IPR001245 GO:0004672|GO:0006468
Sto5g3930 941 ProSiteProfiles Leucine-rich repeat profile. 315 336 IPR001611 GO:0005515
Sto5g3930 941 Pfam Leucine Rich Repeat 243 265 IPR001611 GO:0005515
Sto5g3930 941 Pfam Leucine Rich Repeat 315 335 IPR001611 GO:0005515
Sto5g3930 941 PANTHER UNNAMED PRODUCT 4 54 - -
Sto5g3930 941 SMART LRR_typ_2 144 168 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 460 484 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 74 100 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 314 336 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 289 313 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 436 459 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 241 264 IPR003591 -
Sto5g3930 941 SMART LRR_typ_2 193 217 IPR003591 -
Sto5g3930 941 PANTHER UNNAMED PRODUCT 50 938 - -
Sto5g3930 941 Pfam Leucine rich repeat 459 497 IPR001611 GO:0005515
Sto5g3930 941 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 4 54 - -
Sto5g3930 941 SUPERFAMILY Protein kinase-like (PK-like) 647 929 IPR011009 -
Sto5g3930 941 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 50 938 - -
Sto5g3930 941 ProSiteProfiles Leucine-rich repeat profile. 243 265 IPR001611 GO:0005515
Sto5g3930 941 Gene3D Ribonuclease Inhibitor 3 159 IPR032675 -
Sto5g3930 941 Pfam Leucine rich repeat N-terminal domain 4 46 IPR013210 -
Sto5g3930 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Sto5g3930 941 SUPERFAMILY RNI-like 126 528 - -
Sto5g3930 941 SMART serkin_6 656 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g3930 941 PRINTS Leucine-rich repeat signature 460 473 - -
Sto5g3930 941 PRINTS Leucine-rich repeat signature 316 329 - -
Sto5g3930 941 Gene3D Phosphorylase Kinase; domain 1 623 733 - -
Sto5g3930 941 Gene3D Transferase(Phosphotransferase) domain 1 734 941 - -
Sto5g3930 941 ProSiteProfiles Protein kinase domain profile. 656 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3930 Sto-Chr5 47976979 47983590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3930 10 931 Receptor kinase-like Gene Family AT5G65700 55.183 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto5g3930 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3930 - - gmx:100815103 1315.83