Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3909 ATGGCAATGACAAATAAAAGCTCTATAATCTTTATTTgtgtctcttttctttttcttgcacTCGCTATAACTTCCTTACCATGTGATGCTATTGAAGCTGACGATGATCGCAAAACATATATCATCTATATGGGATCACTTCCGGAGCTATCATCATACTCTCCAACCTCACACCATCTTAGCATTCTCCAACAAGTTGTTTATAGTGGCGGAAATGAAACCGACGCCACAAGTTCCTTAGTTCGAAGCTACAAGAGAAGCTTCAATGGATCGTGGGACTTCATGGGATTCGTCGAGAATGTTATAGCAACGGAAAGAAACTCGTCGGCGGAAAGCGAGGTCATAGTGGGAGTTATTGACAGCGGAATATGGCCAGAGAGTGAGAGTTTTAGCGACGAAAATTTTGGCCCTATTCCAGAGAAATGGAGAGGGACGTGTGCTGGTGGGAAGAACTTTACATGCAATAGAAAAATAATAGGAGCGAGATATTATCATAATAGCGATTCTGCAAGAGACACAGATGGCCATGGAACTCACACTGCTTCAATAGCAGCAGGAAACATTGTTCATAATGTTAGCTTTTATGGAATAGCTCAAGGTACGGCAAGAGGAGGGGCCCCACATGCAAGAATAGCTGCATATTCAGCTTGCCCAACAACATTGTGTGGTAGCGATGATATCTTAGCTGCTTTTGATGATGCAATTTCCGATGGCGTCTCTGTTATTTCAATATCTATCGGATCTTCCATGGGTTATGACGACTCCATAAATGGCTACGAGTTATTGAGATATGACTTCGGAAGTGTCGCAATTGCCATAGGCGCTTTCCATGCCATGGAGAGAGGAATCCTCACCGTCCAATCCGCCGGCAACAGGGGCCCTGATCCCTCCTCTATTATCGATGTCGCGCCATGGATCCTCATTGTAGCAGCAAGTAGTACAGATCGGAGGATGATTGACAAAATGGTTCTTGGAAATGGACACACAATAATTGGGAATTCTATAAATCCCATTGCATCAAATGGAACGAAATTCCCAATAGCACCAAAAAATGGTGGTTCAAGTAATTGTTCTGCAATTGATGCTGAAAAGTGCCTTTGTTTTGACACAGATCTTGTGAAGGGAAAGGTTGTTATGTGTCCTAGTTTGTTGCTCGATTCTAATAGTACTGCAGAATCTCAAGGAGTTGTTGGCATTATCACAAATGCAGGTTTGTATGATGATATATCCTTCGTGGCATGGCTATCATCGTTGTGGGTTTCGTCAAAGGATTATGACATGATTAAGTTCTATGTCAACTCAACCAAAGAGCCAACTGTTGAAATTATGAGGAGCGAGACTTTTGAAGATGTTACTGCACCTACTGTGGCAAAGTTCTCTTCCCGAGGGCCAAGTTTGAAGATTCCAGAAATTTTGAAACCAGATATAACTGCCCCAGGAATTGATATTTTGGCTGCATATTCACCAGTTGGGTCAGTGTCAGGCTTTGATGAAGACAAAAGATCTGTGGGATACAACATATTAATTGGGACATCCATGTCTTGTCCACATGTCACTGGAGTAGCTGCATATTTGATGAGTCTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATTTTAACAACAGCGAAACCTATGGAGAAATCTTATTATGCAGATCTGGTTGGTGAATTTGAGTATGGATCTGGGCATCTGAATCCAATTCAAGCAGTAGAACCTGAAGTTCTCACATTCATGTCATTGAATGAGAAGAAGTCTTTTCTTGTTACTGTTGTTGGAGAGGAAATCTCAAATCAGACTGTGATTTCATCATCATTGGTCTGGTCAGATGGCACCCACAATGTGAGAAGTCCAAGTGTTGTGATGGGCTAG 1878 0.4169 MAMTNKSSIIFICVSFLFLALAITSLPCDAIEADDDRKTYIIYMGSLPELSSYSPTSHHLSILQQVVYSGGNETDATSSLVRSYKRSFNGSWDFMGFVENVIATERNSSAESEVIVGVIDSGIWPESESFSDENFGPIPEKWRGTCAGGKNFTCNRKIIGARYYHNSDSARDTDGHGTHTASIAAGNIVHNVSFYGIAQGTARGGAPHARIAAYSACPTTLCGSDDILAAFDDAISDGVSVISISIGSSMGYDDSINGYELLRYDFGSVAIAIGAFHAMERGILTVQSAGNRGPDPSSIIDVAPWILIVAASSTDRRMIDKMVLGNGHTIIGNSINPIASNGTKFPIAPKNGGSSNCSAIDAEKCLCFDTDLVKGKVVMCPSLLLDSNSTAESQGVVGIITNAGLYDDISFVAWLSSLWVSSKDYDMIKFYVNSTKEPTVEIMRSETFEDVTAPTVAKFSSRGPSLKIPEILKPDITAPGIDILAAYSPVGSVSGFDEDKRSVGYNILIGTSMSCPHVTGVAAYLMSLHPDWSPAAIKSAILTTAKPMEKSYYADLVGEFEYGSGHLNPIQAVEPEVLTFMSLNEKKSFLVTVVGEEISNQTVISSSLVWSDGTHNVRSPSVVMG 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3909 625 Pfam Fibronectin type-III domain 573 623 IPR041469 -
Sto5g3909 625 PRINTS Subtilisin serine protease family (S8) signature 111 130 IPR015500 -
Sto5g3909 625 PRINTS Subtilisin serine protease family (S8) signature 172 185 IPR015500 -
Sto5g3909 625 PRINTS Subtilisin serine protease family (S8) signature 509 525 IPR015500 -
Sto5g3909 625 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 117 IPR037045 -
Sto5g3909 625 Gene3D - 315 449 - -
Sto5g3909 625 CDD Peptidases_S8_3 91 545 IPR034197 -
Sto5g3909 625 ProSitePatterns Serine proteases, subtilase family, serine active site. 510 520 IPR023828 -
Sto5g3909 625 CDD PA_subtilisin_like 322 442 - -
Sto5g3909 625 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 91 575 - -
Sto5g3909 625 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 573 624 - -
Sto5g3909 625 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 39 90 - -
Sto5g3909 625 ProSiteProfiles Serine proteases, subtilase domain profile. 91 573 - -
Sto5g3909 625 SUPERFAMILY Subtilisin-like 108 574 IPR036852 GO:0004252|GO:0006508
Sto5g3909 625 Pfam Subtilase family 112 563 IPR000209 GO:0006508|GO:0008236
Sto5g3909 625 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 90 IPR045051 -
Sto5g3909 625 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 573 624 IPR045051 -
Sto5g3909 625 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 91 575 IPR045051 -
Sto5g3909 625 Gene3D Peptidase S8/S53 domain 118 577 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3909 Sto-Chr5 47721393 47724277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3909 44 607 Subtilisin-like Serine Gene Family AT5G59190 49.751 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3909 - - cpap:110812201 550.821