Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3900 ATGGcaaataaaagttttatattcttCGTTTGCCTGTCTTTTATTTTCCTTGAATTTGTAGTAATTCCCTTACCATGTGATGCCAGTGAAGACAACGATGATCGCAAAACTTACATAATCTACATGGGATCACTTCCTAAGGTATCACCATCTTCTTCTTACTCTCCAACCTCACACCACCTTAGCATTCTCAAACAAGTTATAAATGAAATCGAAGCCACAAGTTTCTTAGTTCGAAGCTACAAGAGAAGCTTCAATGGGTTTGCTGCAAAACTCACGAGGGATGAGAGGGACAAGATAGCTCAAGTGGAAGGAGTGGTCTCTGTCTTTGAAAGCAAAACACTTCACACTCAGACGACAAGATCGTGGGACTTCATGGGATTCGCTGAGAATGTTACAGCAACCAAAAGAAATTCGTCGGCGGAAAGCGAGGTCATAGTGGGAGTTATTGACAGCGGAATATGGCCAGAGAGCGAGAGTTTTAGTGACGAAAATTTTGGCGATGTTCCGAAGAAATGGAGAGGGACGTGTGCTGGTGGGAAGAATTTTACATGCAATAAGAAGATAATAGGAGCAAGATTCTATGGTGAAGGTGATTCTACAAGAGACAAAGTTGGCCATGGAACTCACACAGCTTCAATAGCGGCAGGAAACATAGTTCATGATGTAAGCTTTTATGGAATAGCTAAAGGAACTGCAAGAGGAGGGGCTCCATCAGCACGAATAGCTTCATATGCAGCTTGCCTAGGAGAATCTTGTGCAGAGAATGATATCTTAGCTGCATTTGACGATGCCATTGCGGATGGCGTTACCCTTATTTCAGTCTCTCTTGGAAGTTCCAAGGCATATGGCTTCACAGATGACGTGCTCACGATAGGAGCTTTCCACGCCATGGAGCGAGGAATCCTAACCGTCCAATCCGCAGGTAACGATGGCCCCGGTGAAGGCTCCGTCTCGAGTGTCGCACCGTGGATCCTAACGGTAGCAGCAAGTAGAACAGACCGACGAATCATCGACAAACTGGTTCTTGGAAATGGACAAAAAATAATGGGGATTTCTATAAATTCTTTTGCATCAAATGGATCAGAATTCCCAATAGTTGCAAAACTTGGCGGTTCAAAAAAGTGTCCTAGATTTGATGCTGAAAATTGCTATTGTTTCGACAAAGATCTTGTGAAGGGAAAGATTGTTTTGTGTCCTATGTTATTATCAGAAAATACTGCAAAATCTCATGGCGTAGTTGGCGTTATCACACCTAAAGATGATTGGGATAATGATTGGTCAAATATGGTTTCACTATCTTCATTGGCGATTTCTTCTAAGGATTATGATATGGTTAATTCTTATGCGAATTctaccaaaaacccaaaagctGAAATTTTGAAGAGTGAGGCTATTAAAGATATTACTGCACCAATAGTAATAAACTTCTCTTCCCGAGGACCAAATAGTATAGTTCCTGAAATTTTAAAACCAGATATAAGTGCCCCTGGAGTCGAAATTTTAGCTGCATTTTCACCAGTTGGACCAGTGTCAAGCTATGATGAAGACAAAAGATCGGTGAGATACAACATATTATCCGGGACATCTATGTCTTGTCCTCATGTTTCTGGAATAAGCGCATATTTGAAGAGTCGTCACCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATTTTAACAACAGCAAAACCTATGAAGAAgtctttttcttttgatttggtTGGTGAGTTTGAGTATGGATCCGGGCATGTCAATCCATTACAAGCCGATGATCCTGGGTTAGTCTATGACATATCTAAGGACGATTATTTGGAAATGTTATGCAACTTGGGTCTTAATGCTTCAGATGTTAAGTTGATATCCGGAGAAAATTACACTTGTCCTGCAACTTCTCACAGAGATTTGGTGAAAAATCTAAATTATCCTTCGTTGACAGCTAAAGTTGAGGCTTTGAAACCTTTCAAGCTCATGTTTAATAGAACGGTGACAAATGTTGGGTTCGCCAATTCAATCTATAAGGTAAGTGTTTTACCAAATTCAAAGATGAATATTAGTGTAGAACCTGAGATTCTCTCATTCAAGTCATTAAATGAGAAGAAGTCTTTTGTTGTTAGTGTCGTTGGAGGTGAAATCTCATATCAAAATGTGATTTCTTCATCATTGGTGTGGTCAGATGGAACTCACAATGTGAGGAGTCCAATTATTGTGATGGTTTAG 2220 0.3959 MANKSFIFFVCLSFIFLEFVVIPLPCDASEDNDDRKTYIIYMGSLPKVSPSSSYSPTSHHLSILKQVINEIEATSFLVRSYKRSFNGFAAKLTRDERDKIAQVEGVVSVFESKTLHTQTTRSWDFMGFAENVTATKRNSSAESEVIVGVIDSGIWPESESFSDENFGDVPKKWRGTCAGGKNFTCNKKIIGARFYGEGDSTRDKVGHGTHTASIAAGNIVHDVSFYGIAKGTARGGAPSARIASYAACLGESCAENDILAAFDDAIADGVTLISVSLGSSKAYGFTDDVLTIGAFHAMERGILTVQSAGNDGPGEGSVSSVAPWILTVAASRTDRRIIDKLVLGNGQKIMGISINSFASNGSEFPIVAKLGGSKKCPRFDAENCYCFDKDLVKGKIVLCPMLLSENTAKSHGVVGVITPKDDWDNDWSNMVSLSSLAISSKDYDMVNSYANSTKNPKAEILKSEAIKDITAPIVINFSSRGPNSIVPEILKPDISAPGVEILAAFSPVGPVSSYDEDKRSVRYNILSGTSMSCPHVSGISAYLKSRHPDWSPAAIKSAILTTAKPMKKSFSFDLVGEFEYGSGHVNPLQADDPGLVYDISKDDYLEMLCNLGLNASDVKLISGENYTCPATSHRDLVKNLNYPSLTAKVEALKPFKLMFNRTVTNVGFANSIYKVSVLPNSKMNISVEPEILSFKSLNEKKSFVVSVVGGEISYQNVISSSLVWSDGTHNVRSPIIVMV 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3900 739 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 37 738 - -
Sto5g3900 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Sto5g3900 739 Gene3D Peptidase S8/S53 domain 145 604 IPR036852 GO:0004252|GO:0006508
Sto5g3900 739 CDD PA_subtilisin_like 341 460 - -
Sto5g3900 739 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Sto5g3900 739 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Sto5g3900 739 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Sto5g3900 739 Pfam Subtilase family 143 564 IPR000209 GO:0006508|GO:0008236
Sto5g3900 739 SUPERFAMILY Subtilisin-like 136 590 IPR036852 GO:0004252|GO:0006508
Sto5g3900 739 Pfam Fibronectin type-III domain 639 737 IPR041469 -
Sto5g3900 739 Pfam Peptidase inhibitor I9 37 117 IPR010259 -
Sto5g3900 739 Gene3D - 608 739 - -
Sto5g3900 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 738 IPR045051 -
Sto5g3900 739 ProSiteProfiles Serine proteases, subtilase domain profile. 122 591 - -
Sto5g3900 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 117 IPR037045 -
Sto5g3900 739 CDD Peptidases_S8_3 115 563 IPR034197 -
Sto5g3900 739 Gene3D - 334 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3900 Sto-Chr5 47566874 47602771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3900 42 736 Subtilisin-like Serine Gene Family AT5G59190 55.064 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3900 - - qsu:111995816 785.408