Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3867 ATGGCGGAAATCGTAATATCAATCGCCGCCAAACTTGCTGAATATTTGGTGCAACCAACCATAAGTCAAGGACGGTATTTGATTTGCGGAGCTAAAATCACAAGAAACCTTGAATTAGAGAAAGAGAGGCTGGTTTTAACTCGAGAAAGTGTGCTGCGACTTGTTGAAGAAGCCCTAAACAGAACCGAGATAGTCAATAAAGTTGTTGAGAAGTGGCTAGAAGAAGTGGGAAGTGTGCTAGCGGAGGTGGAGAATTTGGAACAAGAATTGAGGGCAAACAATGGCTGTTTTCGAGGGTGGTGTCCTAATTGGAGGAGATATAGTCTATTCAAAGAAATGGCAAAGAAAACGGATGTAATGATGAAGCTGAATACGAACAGGGATTTTAATCCATTTTCATTCCGAGCTAGACTTCCAGATATAGAGTATTTCTCTTCTGGAAATTTTATGTATTTCAAGTCTACAAAGTTGGCTGCTGATGAACTTTTGAAGGCACTTGGAGATGATAGTATCCATATGATTGGGTTGTATGGCATGGGAGGTTCGGGTAAAACAACGTTGGCAAAAGAAGTGGGCAAGAAAGCCAAGGAAGCAAAGCTTTTTGATCGTGTGATATTTACCACAGTGTCCCAAACTCCTATTATTAAAAGGATCCAACAAGAAATCGCTGACTTGTTGGGTCTACGATTTTCTTTCCGTGTAAGTGAAGTTGAAAGGGCAAGAAAAATAGCATTCAGATTACAAGGAGGAGAACGAATTCTTGTGATATTGGATGATGTGTGGGGAAAACTCAATCTTGAGGAAATTGGGATTGCTTTTGGTGAATTAACCTACAAGTTCAAGATCATTTTAACCACTCGTCGTTTACAACTATGTGCTTTGATGGATTGTCAAAAGCAAATTCCATTGAATCTCTTATATGAGGATGAAGCTTTGACCTTGCTTCAGAAGCATGTTGGTTTAAATGACAAATACTTCACTCTATTAAATGGTTTGGCTGAGGAAATTGCTAGGGAATGTAAAGGACTACATATTGCCATTGAAGCTGTGGGGGCATCATTGAAAGGAAAATCTGTTGATGAGTGGAAAGTAGCATTGGACAAGCTAAAGCATTCAAAACCTATTGACGTAGAAGATGGTGTTAAAGATGCTTTCACTTGTCTTAAATTAAGCTATGATTATTTGAGAAACAAAGAAGCAAAGTTGCTCTTTTTGATGTGCAGTATGTTTCCTGAAGATCATGATATCTCTGTCGAAGATTTGTTTCGATATGGAATAGGTTTGGGTCTATGTGGGGAAGTGGACTCTTTTGAACTAGCCAGGAGCCAAGTGAATGTAGGTATAAATAATCTCTTAAGCTCGTGTTTGCTGATGCGCTCTGAGAAAAAAGACCATTTAAAGATGCATGATGTGACTCGTGATGTAGCTTTGTGGATAGCACGTAAAGAGGATCTCCCCATTCATGTGATTCTCGGAAAAAACTTGAGCATGTTGGCCGAGGATGGAGCTTTCAAAGACTGTTATGCTGTATCTTCATACTATCAGGAAATAGACAAACTTCCTTGTCAATTGGATTGGCCAAAGCTTGAGATTCTTATACTAAATACATCATGGTCCTTGCGATCATCTCGTGCTTCTTTTGAAGGGATAAAAGGGCTCAAGGTTATGGCCATAACTGctgtaaattattttaaagctGCATTCTTATCACTTCCACGATCAACTTGGTTGTTGAATAATCTTCGAACTCTGCGCTTGGTAGAATGGCATTTAGATGACATCTCTTCTGTGGTAAATTTAGCAAGCCTCGAGATTCTTGATTTGCGTGGATGTCACGTCACTCTACCTAATGGAATTGAAAAACTCAAAAAATTGAGGTTGCTGGATTTGTCATTAAGCCGAATTGGGAATTCTTTTGAAGTAATAAGAAGATGCTCACAACTGCAAGAGTTGTATCTTTTTAGAGCTTCCCCTATTGTTACATCTGAATGTTTTCATCCGGATACTAAATTGCAGAGATATGCATTAGAAATTGGGCGATGCAACCAGAAAATCCCTAGGCATTTAGTTAGTAAAAGAAGTTTATACCTGGGCGAGCCTAGCATCTCCACCTCTGATATGTTTATTAAGGACCTTCTACGAAGAGCGGAAGATGTTTATTTGGGTTTCCATCAAGGATGTTGCAAAAATATTATACCAGAGCTGGTTCAAACTGTAGGAGGCATGAATGAATTGACAAAACTCAGGCTTTATGCTTGTTCAGAGATAGAATGTCTCATTGATACAAGTTCTTATTCATTTCAAGTGGATGTTGTGTACCCCAAATTGGTCAACCTAGTCCTGGAAAACATGGAGAATTTGAGTGAATTAATTTGTGGTCCAAGTCTGGTTTACTTCTTTGAGAATTTAGAAGAGGTTCATTTAACACACTGCTTCCAATTGCGCAGCATATTTCCAAAGGAATGCAACTTATGCAGTCTTAATGTTCTAAAATTAGAACATTGTCCAACATTGATAACATCACTGTTCCCTATGTCTGTTGCCCAGACCATGGTCCTTTTACAAGAGCTAACTGTAAAAAATTGCTGTGAATTGAAGTGTTTACTAACAACTGAAGGAGAGGAAATAACTCCAGATAATTCTGGTTTTCTGTTCCCCAAATTGAGGATTCTATCTGTTGCTTCTTGCCAAAATTTAGAGTTCATATTCCCAATTTCCTGTGTTCAAGGCCTCAAACAACTACAAGAGATAAGTATAGTTGACGCTTCTAAGTTGAAATATGCGTTTGGTCAACACGGCCATGAAAGCCATTTGGCATATCAGACTGAGATTTTACTTCCATTTCTTGGCATACTCCGACTTGAGGGCCTATCAAATCTTCTAAGCATTTTCCCAGAAAACTATCCTTCAAGGTGGCCATCTCTAACAGAGCTACACTGGGTAAATTGTCCAATGTTGGCCTTTCCAGGAATGAATGTCATGGCTGATTCAGAATTAAGACAACTGCATCTAAATAAAGGGCAGGGGGCAGCCGCATTTGAGACGAGCAGGAACCAATTGAGTAATGAAGCATTATTACCAACTGTTTTAGAAGTAAAAGAAGTTGAGATTCAAAATTGTGCAGTAGTAAACATATTCCACCTAGAGAGAGTCGAGCAGGTCATGGCATCTAAATTGGAATCACTGAGGTTAACAAATCTACCAGAATTGAGGTCTATATGGATGGGATGCTCTTCCACACAAATCCTGACCCTTCAATATCTCCAGCATTTAGAAGTGTATGATTGTGGAAAATTGAAATCTGTATTCTCCTCCATAATTTATACTTTTAGCATTCCAATGTTGACAACCTTGATCATATCTAACTGtgaggaattggaggaaataatTGCTGAGAATGAAGAACCTCATAGCCTGGGTAATGCTCAAATTTGCTTTCCAAAGCTCAGAGAGTTACAGGTGTTGCGGTGTAACAAGTTAAAAAGGCTTTTCTCTACTGCCGTGGCTAGAATGCTTCCACATCTGAAGTTTCTGATTATCGCAGAGGCTGCTGAACTGTTGGTGGTTTTCAAGCACAAAAATGGAGATTGCACCAATAGCAAAGTCAAAATTGAGCTCCCAAATTTGAGGAAGATACAACTTTTAAAATTGCCAAATCTCATTGAGTTCTGCCAAGAGGAAATATTGCTCCCGACTTTAAAAATGATCGAACTCATAGCATTGCCAAGTCTTACTGAGTTTTGCCAAGGATTTAAATTACCTTCTGTGAAGCTTCACAAGATGATCATTGAGGAATGCCCTAAATTGAATTCAATTTCAGGACGAAGTCCAGTCATTTCGTTACCCCAAATAACACAGGAGCAGCAGGAAAATGGCACAAGTGGCAGCCAGTTATGTAATGAAGTTTCTGCTCTGCTACCTAATGATTTAAATGTTAATAATCTTGTGATTGAAGATTGCCTGGCAATGAATCTATTTTATCCTGAGGGAGTAGAGTCTGTGGCCTCAGAATTAGTAAGCTTACAATTAAAGAATTTTCCTGAGATGAGACTCATTTGGATGGATTGTACACACTTTGTGAGCCTCTATGGTCTTCAAGAACTAAGTGTATATAATTGTGGAAAATTAAAATCTGTCTTCTCAGCGAACATTCATAGAAGCCTACCACAATTAATGCGACTAAGCATATTTAATTGTGAAGAATTGGAAGAAATTATTGCTGAGAATGATGACACTCAGAATCTATTGAATGGTCAAGTGTGTTTCCCAAAACTAGAAAGTTTAAAGGTGGAGGGATGCCACAAGTTGAAAAGTCTTTTTTCTGCCACTATGGTAAGAATGATTCCACAACTGAATTCTCTGCATATATCAAACTGTGGTCAACTGCAGGAGATTTTTGGATTTGGAAATACAGAAGATAACAACATCAACAATAAGAAAGAAATTGTACTTCCTCACTTGAGACAAGTAAGTCTTGGAAAACTATCTAATCTCATTGACATTTGTCAAGGTTGTACATTACATGCAATTACGGATGGTGAAGTTTCACATGAAATCCTAGCTCTCCAAGCTGTTCTAAATGTGAAAATGCAATTGGGTGTGAATGAGGAACAAGGGCCAATCATGGTGTCAAATCTGGAAAGTTTAAGTTTGGAGTTGCCTGAGCTGGAGTTTATATGGAAGGGTCCAACACTTATAAGCTTTCAATTTCTTACAAGTTTGTTTGTCATAAGATGCAGAAAATTGAGGTGCATCTTCTCTGGCGCTATCATTAGAAGCCTGCCACAATTGGAAAGTCTAAATATACGGGATTGTGAAGAATTGGAGGAAATCATTTCAGAAGAAGAAGCACACTTTCCAAACCCATCAACCTCTTATTCCCAAGAGCCCAGCTTCCCAAAATTGAGACATCTTGATGTTGGTGGATGCAACAAGTTGAGATATGTTTTGCCTCTCTACATCTTAGGGGATCTTCCACGTTTAGAGGATTTTTGGTTAAGCAGTTGCTCTCAGCTAGAACAAGTTTTTGGTTGTGTGCCTGAAAATCATGACGCGCATAGAAAAGAGGGTCCAACCGTGATAAGCTTTGCGAGAGTCGAAGGTTGCAGAAAATTGAGATGCATCTTCTCTGCTGCTGTCATTAGAAGCTTGCCACAATTGGAATGTTTATATATAGAGGATTGTGAAGAGTTGGAGGAAatcatttcatcatcatcatcatcatcagaagCACACTTTCCAAACTTGAGACGCCTTAAAATTGAAGGGTGCAATGGGATGAAATGTGTTTTCCCTGTCTCCATCTTAGGAGATATTCCATGTCTAAAGAATCTCAAAATAAGAAGGTGCTCTCAGCTAGAGCAACTTTTTGGTTGTGTGCCTGAAAATCATGATGCAGAGATGATGGAAATTGAGTTCCCAAACTTGACAGAATTAAGACTTGAAGAATTGCCCGATCTAGTTGACATTTGCCAGGGCTTTACATTTCATGCGGTGAAGCTTTCTGAGGTCAGGATAGACGAATGTCCCAAATTTGCTCCATTTTCTAGACCAAATCAAGAAATTTCTGTTGACCAAAGTAAAAAGGTTGTTAGGGATGGTCGGATGGCACATGAAATGCAAGCTCTCCAAGCATTTCTTAATGTAAAAGAAGAAGGGGCAATCATGGTGTCTAATTTGAATAGATTAGAATTAAAGAATATAGGTGAGATGGAGTTTATATGGAAGGGTCCAACTCTGATAAGTTTCCAACGTCTTGAAAGGTTGAGAGTTGAAGGATGCAGAAGGTTGAGATGCATCTTCTCTAGCGCTTTCATTAGAAGTCTCCCACGATTGTATGAActgtatataattaattgtgaAGAGTTGGAGGAAATCATTTCATTACCTGAAGAAGAAGCAAACTTTCCAAACGCATCATCAACCTCTCATCCCCAACACCCTTACTTTCCAATGCTGAGTCATCTTTATGTAGAAGGATGCAACAGCTTGAGATGTGTTTTCCCTCTCTCCAACTCGCTATATCTTCCATGTTTACGGGGACTCTTTATAAGAAGGTGCTCTGAGCTAGATCAAGTTCTTGGTTGTGCGCCTCAAAATCTTCCAAACTTGTTATTTGTAACATTGGAACAATTACCCAACCTTACCAACTTTTGTAGAGGTTTTGAGTCTCAGCTCAAGTTGGATGCTTTAAAAGAGTGTGAAGTGAAGGACTGTCCCAAGTTTTCCTCAACCACCATTCCTGCTCTCCACAAGTTTATCACTCCAACTCAAATTCAGGACACAGATGAGAACCagaaagaagagaaggaaaataaCATTGATTATAATGTTGGTGGTGAAACTTTTGACAACATCAACGATAGTAACGATGAAGACGAAGATGAAGATAAAGATGTAAATGaagacaataaaaataataatgtcgAAGATGGTGAAGAAGATGACAAAGATGAGGATATTGATCTTGTTGGTTTTCTTGACAATGATAATGCTTGA 6498 0.3815 MAEIVISIAAKLAEYLVQPTISQGRYLICGAKITRNLELEKERLVLTRESVLRLVEEALNRTEIVNKVVEKWLEEVGSVLAEVENLEQELRANNGCFRGWCPNWRRYSLFKEMAKKTDVMMKLNTNRDFNPFSFRARLPDIEYFSSGNFMYFKSTKLAADELLKALGDDSIHMIGLYGMGGSGKTTLAKEVGKKAKEAKLFDRVIFTTVSQTPIIKRIQQEIADLLGLRFSFRVSEVERARKIAFRLQGGERILVILDDVWGKLNLEEIGIAFGELTYKFKIILTTRRLQLCALMDCQKQIPLNLLYEDEALTLLQKHVGLNDKYFTLLNGLAEEIARECKGLHIAIEAVGASLKGKSVDEWKVALDKLKHSKPIDVEDGVKDAFTCLKLSYDYLRNKEAKLLFLMCSMFPEDHDISVEDLFRYGIGLGLCGEVDSFELARSQVNVGINNLLSSCLLMRSEKKDHLKMHDVTRDVALWIARKEDLPIHVILGKNLSMLAEDGAFKDCYAVSSYYQEIDKLPCQLDWPKLEILILNTSWSLRSSRASFEGIKGLKVMAITAVNYFKAAFLSLPRSTWLLNNLRTLRLVEWHLDDISSVVNLASLEILDLRGCHVTLPNGIEKLKKLRLLDLSLSRIGNSFEVIRRCSQLQELYLFRASPIVTSECFHPDTKLQRYALEIGRCNQKIPRHLVSKRSLYLGEPSISTSDMFIKDLLRRAEDVYLGFHQGCCKNIIPELVQTVGGMNELTKLRLYACSEIECLIDTSSYSFQVDVVYPKLVNLVLENMENLSELICGPSLVYFFENLEEVHLTHCFQLRSIFPKECNLCSLNVLKLEHCPTLITSLFPMSVAQTMVLLQELTVKNCCELKCLLTTEGEEITPDNSGFLFPKLRILSVASCQNLEFIFPISCVQGLKQLQEISIVDASKLKYAFGQHGHESHLAYQTEILLPFLGILRLEGLSNLLSIFPENYPSRWPSLTELHWVNCPMLAFPGMNVMADSELRQLHLNKGQGAAAFETSRNQLSNEALLPTVLEVKEVEIQNCAVVNIFHLERVEQVMASKLESLRLTNLPELRSIWMGCSSTQILTLQYLQHLEVYDCGKLKSVFSSIIYTFSIPMLTTLIISNCEELEEIIAENEEPHSLGNAQICFPKLRELQVLRCNKLKRLFSTAVARMLPHLKFLIIAEAAELLVVFKHKNGDCTNSKVKIELPNLRKIQLLKLPNLIEFCQEEILLPTLKMIELIALPSLTEFCQGFKLPSVKLHKMIIEECPKLNSISGRSPVISLPQITQEQQENGTSGSQLCNEVSALLPNDLNVNNLVIEDCLAMNLFYPEGVESVASELVSLQLKNFPEMRLIWMDCTHFVSLYGLQELSVYNCGKLKSVFSANIHRSLPQLMRLSIFNCEELEEIIAENDDTQNLLNGQVCFPKLESLKVEGCHKLKSLFSATMVRMIPQLNSLHISNCGQLQEIFGFGNTEDNNINNKKEIVLPHLRQVSLGKLSNLIDICQGCTLHAITDGEVSHEILALQAVLNVKMQLGVNEEQGPIMVSNLESLSLELPELEFIWKGPTLISFQFLTSLFVIRCRKLRCIFSGAIIRSLPQLESLNIRDCEELEEIISEEEAHFPNPSTSYSQEPSFPKLRHLDVGGCNKLRYVLPLYILGDLPRLEDFWLSSCSQLEQVFGCVPENHDAHRKEGPTVISFARVEGCRKLRCIFSAAVIRSLPQLECLYIEDCEELEEIISSSSSSSEAHFPNLRRLKIEGCNGMKCVFPVSILGDIPCLKNLKIRRCSQLEQLFGCVPENHDAEMMEIEFPNLTELRLEELPDLVDICQGFTFHAVKLSEVRIDECPKFAPFSRPNQEISVDQSKKVVRDGRMAHEMQALQAFLNVKEEGAIMVSNLNRLELKNIGEMEFIWKGPTLISFQRLERLRVEGCRRLRCIFSSAFIRSLPRLYELYIINCEELEEIISLPEEEANFPNASSTSHPQHPYFPMLSHLYVEGCNSLRCVFPLSNSLYLPCLRGLFIRRCSELDQVLGCAPQNLPNLLFVTLEQLPNLTNFCRGFESQLKLDALKECEVKDCPKFSSTTIPALHKFITPTQIQDTDENQKEEKENNIDYNVGGETFDNINDSNDEDEDEDKDVNEDNKNNNVEDGEEDDKDEDIDLVGFLDNDNA 2165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3867 2165 Gene3D - 392 477 IPR036388 -
Sto5g3867 2165 Gene3D - 146 301 IPR027417 -
Sto5g3867 2165 SUPERFAMILY RNI-like 1336 1764 - -
Sto5g3867 2165 SUPERFAMILY RNI-like 1891 2083 - -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 1474 1687 IPR032675 -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 1695 1805 IPR032675 -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 1879 2026 IPR032675 -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 1294 1473 IPR032675 -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 997 1189 IPR032675 -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 682 939 IPR032675 -
Sto5g3867 2165 PANTHER - 7 1134 - -
Sto5g3867 2165 PANTHER - 1742 1965 - -
Sto5g3867 2165 PANTHER - 1419 1617 - -
Sto5g3867 2165 PANTHER - 1138 1414 - -
Sto5g3867 2165 SUPERFAMILY RNI-like 885 1165 - -
Sto5g3867 2165 Coils Coil 69 93 - -
Sto5g3867 2165 Pfam NB-ARC domain 160 393 IPR002182 GO:0043531
Sto5g3867 2165 MobiDBLite consensus disorder prediction 2119 2133 - -
Sto5g3867 2165 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1138 1414 - -
Sto5g3867 2165 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1742 1965 - -
Sto5g3867 2165 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 7 1134 - -
Sto5g3867 2165 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1419 1617 - -
Sto5g3867 2165 Gene3D Ribonuclease Inhibitor 501 672 IPR032675 -
Sto5g3867 2165 SUPERFAMILY L domain-like 464 921 - -
Sto5g3867 2165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 407 IPR027417 -
Sto5g3867 2165 Gene3D - 306 391 IPR042197 -
Sto5g3867 2165 CDD AAA 176 286 - -
Sto5g3867 2165 PRINTS Disease resistance protein signature 173 188 - -
Sto5g3867 2165 PRINTS Disease resistance protein signature 247 261 - -
Sto5g3867 2165 PRINTS Disease resistance protein signature 340 354 - -
Sto5g3867 2165 PRINTS Disease resistance protein signature 598 614 - -
Sto5g3867 2165 MobiDBLite consensus disorder prediction 2090 2165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3867 Sto-Chr5 47067902 47084382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3867 171 483 WRKY Transcription Factor Family AT5G45050 26.791 1.83e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3867 - - lang:109341976 1050.81