Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3838 ATGGGAGGTTCGGGCAAAACAACCTTGGCAAAAGAAGTGGCTAACAAAGccaagaaattagagaaatttgaACATGTTGTGCTTACTACTGTATCTCAAACTCCGAATGTTCGGAATATTCAAGGAGAAATTGCTGATCTACTAGGTGTGAAATTTACAGAAGAATCAGAAATTGGAAAGGCAGGACGAATATCATTAAGATTGCAAAGTGGAGAACGAATCCTTGTGATATTGGATGATGTATGGGCAAAGCTCAATTTAGAGGAAATTGGAATTCCTCTCAATGGCAGTCAACATGGCTATGATTATTTGAAAGACAAAGAATCCAAGTTGTTATTCTTAATGTGTGCTGTGTTTCCGGAAGATCATAGAATCAAGCCTGAAGACTTGTTCAGATATGGGATAGGATTGAATGTATGCGCACAGGTGGATTCATTTGAAATGGCCAGGAGTTTTGTGAATGATGCCAAAAACCGTCTTATAGAGTCTAGCTTACTGATGCGTGACAATGACAGAAATGGAGCTACATTTTATAGGATGCATGACATGGTCCGTGATGTAGCATTATGGATAGCAACCAAAGAGAATCGTACCATAGTGGTAAACCATGCAACAAGGCAAAATTCACCATTAGAAGATGGAGCTATAAGAGATTGTTATGCATTGAGTTGTTGGAACATGGACAGAAATCTTCCTCAACAATTAGACGCTCCAAAGCTTGAGATGCTATTGCTAAATATAGAAGCAAGGGGTCTTGATTTTTCACTTCCATCATTTGAAGGTTTCAAAAGGATGAAGGTTATGGCTATAATGAATCACATTGTTTTATTTGGGAGGAAGACATCATTAACATTGTCTCATTTAACCCATTTGTTGACTAATCTTCACACTTTGCGATTGGTAGGAATGAATTTAGATGACATCTCTTTTGTTGTAAGTTTAAGAAGTCTTGAGATTCTTGACTTCCGAAAGAGTGCATTGAAAGAACTACCAAATGGATtagaaaaattgaataaattaaaattgttggATTTGTCAAAAAGTAAAATTGATGGCCATTGTTATGAAGTAAGAAAAAGGTGCTTACAGTTGGAGGAGTTGTATGTGTATAGAGAATATCGTTGGGGTGGTGATGGATTCAACAATTCTAATACATTTTGTCTTGAAGATGCTACTTTTTCAAAATTACAAAGGTATCAATTAGAAGTTGGGGAGATTGGAACAATTATTTTTGATGTCAGCTTATGTAAGAGAAGTTTGTTCATTGAAGGTTTGAATGTCTCCACCTCAGgtgCAAATATTAAAGATCTTCTACGACGAGCAATTAAAGTTGGTCTAAAGATGCTTAAAGGAGGTTGCAAAAATGTCATCCCGGAATTGGTTCAAGCTATAGGAGGCATGAATGAGTTGATTGGGCTTTATCTTCAGTCTTGTTCTGAAATTGAATGTGTCTTCAACACAACTTCTCTTATGGCCTCTTCCCTTGATGCAAGTATTGTGGTTCAAAGTCTACTATTGATACAAGAGCTCCAAATAGAAGACTGCAATGAGttgaaatatataatgaaaagtGGAGTATCtgataataattataaaggGAAGCAAATAGTAGCAGTGCCAGACAATTCTTGTTTGTATTTCTCTCGGTTGAAGAAATTACACATCCATAGTTGTTGGAGTTTGGAATACATATTTCCAATCTCTGTGGTTCAAAGACTTGAGCAATTAGAAGAGATAAGTATAAAGAATGCACCTCATGTGAAGTATCTTTTCAGTGAGCCTGATCATGAATATCATTCATCTTCTCAGAATGAGATTCAAATTGTTCTTCCTCACTTGAAAGTAGTCGGCTTACTGCGCCTTTTGAATCTTGTCAACATTTTTCCGGAAAGCTATCAATATCGACTAAGTTGGACATGCTTGACAGAGTTTTGCTGGGTCGATTGTCCCAAATTGACGATTGATTGGATTGGGAGCACATACAACAAAGTTAATTTAGAGCAAAGACAATCATTCTTGAATAAGGGTTTAGAAGGAAATGCTACAAATGATAGCAAATCAAGTAATGAAATTTCAGCTCTTTCATGTGTTGATTTTGTGGGAGGTGCAATGGATTTATGCTTTTTTCCAGAGATAGTTAATCCTGTAGCCTCAATTTTAACACAATTAACGTTGGGGAATCTACCTGAGCTTAGGCACATATGGATGGGTTCTGCAGAGCTTTTGAGCCTCCAATGTCTTAAGGAATTAGAAGTATATAATTGTGGAAAATTGAAGTCATTGTTATCTCCAGTTGTCCAAAGAAGCCTTCCacaattaaaaactataaagatACGAAGTTGTGAGCAAATAGAGGATATTTTTGGATGTGAAAAGATCAAAGATATCAGCACCAACAAGAAGAAGGAGATTGCGCTtccaaacttaattttcttaacaCTTGAAAAGTTGCCCAACTTCGTTGACATTTGCCAAGGTTTTACATTTCATGCGGTGAAACTTGCTGAAGTCACGATTGATGAATGCCCCAAGTTTGCTCCATTTCTAACAGCAAATCAAGAAATTTCTATTGGCAAGAGTAAAAAGGGCGAGGCACATGAAATGCAAACTGATCTCCAAGCTATTCTAAATGTGAATGAAGGAGAAGGGGCAACGATGGTGTCAAATTTGAGATACTTAGAATTAAAGAATATAGCTGAGATGGAATTTATATGGAAGGGTCCAACTCTGATAACCTTCCAACATCTTCTAATGTTAAAAGTTGAAGGATGCAAAAAGTTGAGGTGCATCTTCTCTAGCGCTGTCAGCCTCCCAGTATTGCATGAATTGAATATAATAAACTGTGAAGAGTTGGAGGAAATCATTTCATTATcggaagaagaagcaaacttTCCAAACCCATCATCAACCACTCATCATCTCCAACAAATATGCTTCCCAGAATTGATGACTCTTCAAATTGAGGGATGCAACAGAGACTTTGAGTCTCGCCTCAACTTGGAGGCTTTAAGAGTGTGTGAAGTAAAAGACTGTCCCAAGTTTTCCTCAACCACCATTCCTGCTCTCCACAAGTTTATCACTCACACAGAGATGATTGAGTTTCAGCTTCCAAACTTGAACTATCTGATACTTAAAGAATTGCCCAGCCTTACTAACTTTTGTAGAGACTTTGAGTATCACATCAAGTTGGAGGCTTTAAAAAGGTGTGAAGTAAGAGACTGTCCCAAGTTTTCTTCAACCACCATTCCTGCTCTCCACAAGTTTATCACTCACACAGTGAAAATGGTTTTGAGTTCCAATGTCAAACACCTAAACCTGCCTAGCTCGGTGCCTCCACTAAAATCAGAATGGAAACAGATTGCGCATAGGGGAATCAAAATACTAAAAAGCCATAAAGAAAATTATGGATTCACCTTGTGGCGCGGCAGTTTCTGTCGAACCACCAAGCTTGTATTTGGGAGGGATTCTTCACAGAGTTCTTCcgagacagagagagagaaacgcGAGGAGAAGACAGTCAGAAAAAAAGGAGGGTATTTCGGTAAATTGCCTCTTCCCCCTCAAGAAGAGAAGAGACTGAAGGAGACTCTTGAAGCTATCATTGGAGCTGGCAAAACAGTTCTCCTTGAACAGAAGGTATTTATTTAG 3648 0.3646 MGGSGKTTLAKEVANKAKKLEKFEHVVLTTVSQTPNVRNIQGEIADLLGVKFTEESEIGKAGRISLRLQSGERILVILDDVWAKLNLEEIGIPLNGSQHGYDYLKDKESKLLFLMCAVFPEDHRIKPEDLFRYGIGLNVCAQVDSFEMARSFVNDAKNRLIESSLLMRDNDRNGATFYRMHDMVRDVALWIATKENRTIVVNHATRQNSPLEDGAIRDCYALSCWNMDRNLPQQLDAPKLEMLLLNIEARGLDFSLPSFEGFKRMKVMAIMNHIVLFGRKTSLTLSHLTHLLTNLHTLRLVGMNLDDISFVVSLRSLEILDFRKSALKELPNGLEKLNKLKLLDLSKSKIDGHCYEVRKRCLQLEELYVYREYRWGGDGFNNSNTFCLEDATFSKLQRYQLEVGEIGTIIFDVSLCKRSLFIEGLNVSTSGANIKDLLRRAIKVGLKMLKGGCKNVIPELVQAIGGMNELIGLYLQSCSEIECVFNTTSLMASSLDASIVVQSLLLIQELQIEDCNELKYIMKSGVSDNNYKGKQIVAVPDNSCLYFSRLKKLHIHSCWSLEYIFPISVVQRLEQLEEISIKNAPHVKYLFSEPDHEYHSSSQNEIQIVLPHLKVVGLLRLLNLVNIFPESYQYRLSWTCLTEFCWVDCPKLTIDWIGSTYNKVNLEQRQSFLNKGLEGNATNDSKSSNEISALSCVDFVGGAMDLCFFPEIVNPVASILTQLTLGNLPELRHIWMGSAELLSLQCLKELEVYNCGKLKSLLSPVVQRSLPQLKTIKIRSCEQIEDIFGCEKIKDISTNKKKEIALPNLIFLTLEKLPNFVDICQGFTFHAVKLAEVTIDECPKFAPFLTANQEISIGKSKKGEAHEMQTDLQAILNVNEGEGATMVSNLRYLELKNIAEMEFIWKGPTLITFQHLLMLKVEGCKKLRCIFSSAVSLPVLHELNIINCEELEEIISLSEEEANFPNPSSTTHHLQQICFPELMTLQIEGCNRDFESRLNLEALRVCEVKDCPKFSSTTIPALHKFITHTEMIEFQLPNLNYLILKELPSLTNFCRDFEYHIKLEALKRCEVRDCPKFSSTTIPALHKFITHTVKMVLSSNVKHLNLPSSVPPLKSEWKQIAHRGIKILKSHKENYGFTLWRGSFCRTTKLVFGRDSSQSSSETEREKREEKTVRKKGGYFGKLPLPPQEEKRLKETLEAIIGAGKTVLLEQKVFI 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3838 1215 SUPERFAMILY RNI-like 456 652 - -
Sto5g3838 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 118 IPR027417 -
Sto5g3838 1215 Gene3D Ribonuclease Inhibitor 687 873 IPR032675 -
Sto5g3838 1215 Gene3D Ribonuclease Inhibitor 418 670 IPR032675 -
Sto5g3838 1215 Gene3D Ribonuclease Inhibitor 874 1034 IPR032675 -
Sto5g3838 1215 Pfam NB-ARC domain 1 98 IPR002182 GO:0043531
Sto5g3838 1215 SUPERFAMILY RNI-like 887 1101 - -
Sto5g3838 1215 SUPERFAMILY L domain-like 179 949 - -
Sto5g3838 1215 Gene3D - 1 109 IPR027417 -
Sto5g3838 1215 MobiDBLite consensus disorder prediction 1156 1181 - -
Sto5g3838 1215 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 729 845 - -
Sto5g3838 1215 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 884 1077 - -
Sto5g3838 1215 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 101 654 - -
Sto5g3838 1215 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1 92 - -
Sto5g3838 1215 PANTHER - 1 92 - -
Sto5g3838 1215 PANTHER - 101 654 - -
Sto5g3838 1215 PANTHER - 884 1077 - -
Sto5g3838 1215 PANTHER - 729 845 - -
Sto5g3838 1215 MobiDBLite consensus disorder prediction 1159 1177 - -
Sto5g3838 1215 Gene3D - 110 189 IPR036388 -
Sto5g3838 1215 Gene3D Ribonuclease Inhibitor 271 400 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3838 Sto-Chr5 46591204 46644698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3838 1183 1213 Primary Pumps ATPases AT5G13450 64.516 2.49e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3838 - - aprc:113857460 444.891