Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3811 ATGGGTACCAATGAAGGGCAGGCAGAGGCAGAGTTGTTTCAGGCTCAGTGCCATTTGTACAAACACATCTACAATTTCATGACCTCCATGTGTCTAAAAGCTGCACTACAACTGAACTTACCAGATATAATCCACAGCCATGGCCGACCCATGACCCTCCCTGACCTGCTCTTGGCTCTCCAGATTGAACCTGCCAAATCTGGCCATGTCTATAGGCTCATGTGCTTGTTGGTTCACTTTGGTCTTTGTCACTACCAAGCTTTGGTGCATACATCAGAGTTCTTGGGAGATTGGTTCCAAGGGAAGGAGCTCACACCCTTTCACACTGCAAATGGGATGGGGTTTTGGGACTATCTGAGTCAGAACCAGGAGTTCTGTACACTCTTCAATGGAGCAATGAGTAGTGATTCTAGCATGATGAACTTGGTTATCAAAGGCTGTAGATCCGTTTTTGAGGGACTCAATTCATTGGTTGATGTTGGGGGTGGTAAAGGAGCTGCCTCTAGGATCATCTCTGAGTCATTGCCTAGTATGCACTGCACTGTGCTAGATCTTCCACATGTTGTTGAGAATATGTCAGATAGCAGTAATCTGAAGTTTGTTGGAGGTGACATGTTTCACTCTATTCCTTCGGCAGATGCCATTCTTCTCAAGCTGGTTTTACATGCTTTTAGCGATGAAGACTGTGTGAAGGTGCTGAAGAAGTGCAGGGCAGCAATTGCAGGCAAAGGCAAGGAAGCGAAAGTGATAATCATAGATATAGTGAAAAATGATGAGAAGAATGATGGGCACGAATTGAAAGAAGCAAAGCTCTTATTCGATGTGGTGATGATGGTTTATGTCActggaaaagagagagaggaaaaagaATGGGAGAAGCTATTCTTGCAAGCTGGGTTCAGTCACTACAAGATAACACCCATATTTGGTCTAAGGTCCCTTATTGAAGTTTATCCTTGA 960 0.4333 MGTNEGQAEAELFQAQCHLYKHIYNFMTSMCLKAALQLNLPDIIHSHGRPMTLPDLLLALQIEPAKSGHVYRLMCLLVHFGLCHYQALVHTSEFLGDWFQGKELTPFHTANGMGFWDYLSQNQEFCTLFNGAMSSDSSMMNLVIKGCRSVFEGLNSLVDVGGGKGAASRIISESLPSMHCTVLDLPHVVENMSDSSNLKFVGGDMFHSIPSADAILLKLVLHAFSDEDCVKVLKKCRAAIAGKGKEAKVIIIDIVKNDEKNDGHELKEAKLLFDVVMMVYVTGKEREEKEWEKLFLQAGFSHYKITPIFGLRSLIEVYP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3811 319 PANTHER ASMT2 93 319 - -
Sto5g3811 319 PANTHER ASMT2 7 86 - -
Sto5g3811 319 PIRSF O-mtase 1 93 IPR016461 GO:0008168
Sto5g3811 319 PIRSF O-mtase 82 319 IPR016461 GO:0008168
Sto5g3811 319 Gene3D - 2 103 IPR036388 -
Sto5g3811 319 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 319 IPR016461 GO:0008168
Sto5g3811 319 PANTHER O-METHYLTRANSFERASE 93 319 IPR016461 GO:0008168
Sto5g3811 319 PANTHER O-METHYLTRANSFERASE 7 86 IPR016461 GO:0008168
Sto5g3811 319 Pfam O-methyltransferase domain 95 301 IPR001077 GO:0008171
Sto5g3811 319 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 318 IPR029063 -
Sto5g3811 319 SUPERFAMILY "Winged helix" DNA-binding domain 9 86 IPR036390 -
Sto5g3811 319 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Sto5g3811 319 Gene3D Vaccinia Virus protein VP39 117 317 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3811 Sto-Chr5 46235177 46237970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3811 30 317 Monolignol Biosynthesis Gene Families AT5G54160 31.118 1.72e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3811 K22588 - qsu:112018723 413.69