Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3763 ATGGCCGAAGTTTCTAGAATCCTCTACACCACCACTACTCTTATTCCCAGCTTCAGTCCATCTCAGAAATCCCATTCTGCTCAGCGTCATCTAACTATTTCACGAAAGCCCCAAATTCATTGCTCTATTTCTGCTAGTGACGCTTCTTCCAGAACCGCCGTGACGGAATCCGCAATACCATGGGGTTGCGAGATTGATTCTCTCGAAAATGCGTCGGGTTTGCAGAGATGGTTGTCGGAATCTGGCCTCCCACCGCAGAAGATGGCCATTGAAAGAGTGGACGTTGGGGAGAGAGGACTCGTTGCTTTGAAGAATGTAAGGAAGGGAGAGAAGTTGCTCTTTGTGCCTCCTTCGCTAGTAATCACTGCAGATTCTGAGTGGAGCTCCCCAGAGGCCGGGGAAATTTTGAAAAGGAATTCAGTGCCAGATTGGCCACTGCTTGCAACTTACCTCATTAGTGAAGCAAGCCTCATGAAATCTTCAAGATGGAGCAGTTATGTATCGGCCTTACCTCGGCAACCCTATTCACTTCTTTACTGGTCACGAGCAGAACTAGATCGATATTTGGAAGCTTCACAGATCAGGGAGAGAGCAATTGAAAGGATTAATAATGTTATTGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAGTATCCTAGTTTATTCCCCGAAGAGGTGTTCAACATTGAGACCTTCAAATGGTCATTCGGCATTCTTTTCTCTCGCTTGGTTCGGTTACCCTCAATGGATGGAAAGTTTGCCTTGGTTCCTTGGGCAGATATGCTAAACCATAGTTGTGATGTTGAAACATTTTTAGATTATGATAAGTCATCAAAAGGAATTGTCTTTACCACAGATCGTCCCTACCAACCAGGTGAGCAGGTGTTTATTTCATATGGCAAGAAATCTAACGGAGAGCTTTTGCTGTCTTATGGGTTTGTTCCAAAGGAAGGCACTAATCCTAGTGATTCAGTTGAGTTATCACTGTCACTCAAGAAATCTGATAAATGCTACGATGAGAAGTTACAACTTTTGAAGAAAAATGGATTGTCAGCATCTCAGTGTTTCCCTGTAAAAATTACTGGTTGGCCATTGGAGTTGATGGCATATGCTTATTTAGCTGTGAGCCCTTCAAGCATGAGAGGAAAATTTGAAGAGATGGCCGCCGCAGCGTCAAATAAAACAACGGCCAAGAAGGATTTGAGATATCCCGAAATGGAAGAACAAGCATTACAATTTATACTAGACAGCTGCGAATCCAGCATATCAAAGTACAAGAAGTTTTTACAGGAAAGTGGATCACTGGATTTGGATGTGACTTCTCCGAAACAACTTAACCGAAGACTCTTTCTGAAACAACTTGCTGTGGACTTGTGTACTAGCGAGCAAAGAATACTGTTTCGTGCTCAATACATACTGCGGAGAAGACTAAGGGATATGAGGACTGGTGAATTAAGAGCTTTAAGAATCTTTGATGGATTCAGAAATCTTTTCCAATGA 1506 0.4276 MAEVSRILYTTTTLIPSFSPSQKSHSAQRHLTISRKPQIHCSISASDASSRTAVTESAIPWGCEIDSLENASGLQRWLSESGLPPQKMAIERVDVGERGLVALKNVRKGEKLLFVPPSLVITADSEWSSPEAGEILKRNSVPDWPLLATYLISEASLMKSSRWSSYVSALPRQPYSLLYWSRAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPSLFPEEVFNIETFKWSFGILFSRLVRLPSMDGKFALVPWADMLNHSCDVETFLDYDKSSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSVELSLSLKKSDKCYDEKLQLLKKNGLSASQCFPVKITGWPLELMAYAYLAVSPSSMRGKFEEMAAAASNKTTAKKDLRYPEMEEQALQFILDSCESSISKYKKFLQESGSLDLDVTSPKQLNRRLFLKQLAVDLCTSEQRILFRAQYILRRRLRDMRTGELRALRIFDGFRNLFQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3763 501 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 27 296 - -
Sto5g3763 501 Gene3D set domain protein methyltransferase, domain 1 20 315 - -
Sto5g3763 501 SMART set_7 86 308 IPR001214 GO:0005515
Sto5g3763 501 CDD SET_RBCMT 85 316 IPR044431 GO:0016279|GO:0018022
Sto5g3763 501 PIRSF RMT_SET 1 498 IPR011192 GO:0009507|GO:0030785
Sto5g3763 501 ProSiteProfiles SET domain profile. 86 302 IPR001214 GO:0005515
Sto5g3763 501 Pfam SET domain 98 302 IPR001214 GO:0005515
Sto5g3763 501 PANTHER - 27 296 - -
Sto5g3763 501 Pfam Rubisco LSMT substrate-binding 335 468 IPR015353 -
Sto5g3763 501 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 332 498 IPR036464 -
Sto5g3763 501 SUPERFAMILY SET domain 71 319 IPR046341 -
Sto5g3763 501 Gene3D - 321 491 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3763 73 271 NAC Transcription Factor Family AT3G56570 23.039 6.63e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto5g3763 SET 3.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3763 - - gmx:100803319 839.336