Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3705 ATGGACCAGAGCAAATCGTCGCCGGTGATGGTCTTCCTCTTGTCTCTCTTGCACTTAATGGCGGCCTCGGATGTGACGAAGCTTACGAACTCCGAGACGCTTTCTTGCACCATAGCTTTCGCGTCCTTGGCTATCTTCGCGTCCTCGGGTAGTACCTGCTTCATTATTCTGATCACGTTCGCTATGGGCAAGAACTTGTCTTTCTCGTTCCATAAGAACTCGTTGTTGGTATTattgccgccgccgccgccctCGTCGTTGTCTGAGTCCGCCATTGTGATCGATCGGAACCAAAGATCGTCGTTCTTGGCGGCGACGATGAGAAGGGAAGTTGTTAATATGGAGCTTGAATGGAAGCCTAGAATTGGAATGGATTTTGACAGCGTGGATAGTGCTTGGAAATTTTGGTCAGACTATGGTGGTAGAATGGGATTCGGTGTTAGGAAGGATTATTCCAACAAGAGTAAAAAAGATGGGTCAATAACTTCTTGCCGATTTGTTTGTCATAAGGAAGGGTCAAGAGAAAAACATAAGAATGATTATTTAATAGTTAATCCTCGACGTGAGACGAGAACTGATTGTAAAGCAAGAATATGCTTCTCCTTTCTAAATGGGAAGTTTAGAGTGAAGGACTTTGTAGAAGAACATAATCATGAACTCCATCCCGCAGAAACTACACATATGATTGCTTCTCAACGGCATATATCTGATATCCAACAACAAGAAATTGAGTTAGCTGATGATTCTGGAATCCAACAAAGGGCCTCTCATACACTTATGAAAGAACTATCTTCGCACCCGACGACAAAAGAGTCTGGAGTACGGGGAGCTGGTTGTTTATTGCGTTATTTCGAAGATCAACAATCGAAAAACCCAGCTTACTTTCAAACATATCAGATGGATTCAGAGGAACAAATAACGAACATATTTTGGGCTGACGCAAGAATGCGATTAGATTATGGCTACTTTGGTGATGTTGTCTCTCTTGACACGACATATTGCACTAACAATGCACACAGGCCACTTGCCttgttttcaggatttaatcATCACAGAGGAGTGGTTCTTTTTGGGGCTGCATTGTTATATGACGAGACAACGGCATCATTTAAGTGGTTATTTGAGACATTCTTGAAagttcataataaaaaaaacctcaAACTATTTTTACCGATCAAGATCAAGCAATGGCCAAAGCCTTACAAGAGGAAGTTTGAGACTTGGGGCATATTGTGTTGCCATGCTCTTAAAGTGTTTGAAGCATACGATGTCAAGAAGCTTCACGatcaatatattttgaaaaggtGGACAAAGGAGGCTAGAACCGGTATTATATATGATGCCAAAGGGAATGAAAGTGAGGATGACCCGAAATTAGGTCGTACACTTCAATATAATTCCCTTTGCCATGAACTTGTCAATATAGCTTCTGAAGTCGCGGGTAAAGAGGAAGAAGTCTCTTTCATTCCTATGGTTATGCATGAGGCCATGAAGAAAGTCATGGAATGTCGCTTGGAAAAAAGGCATGAGACAAACGAGAGAGATGACCCAATTCCACTTAGTAGAATTGATATGCCACAACCAACTGGCATCAAGAAGAGGGCTGGATCTAAAAGAAGGACTCGTATAAAGAGTAGGGTTGAGCTTCGACATCGAAATGGAAAGGCTTCAAAGTCCATGTCACAACCAATCATCACACTTTCTCAAAGTGAACAATCCACAGACCAAAGTGAAGGACCAATCTCTCTTGGAGGACCAGAGCTTGGTGGTGACAAGCTATGA 1782 0.4068 MDQSKSSPVMVFLLSLLHLMAASDVTKLTNSETLSCTIAFASLAIFASSGSTCFIILITFAMGKNLSFSFHKNSLLVLLPPPPPSSLSESAIVIDRNQRSSFLAATMRREVVNMELEWKPRIGMDFDSVDSAWKFWSDYGGRMGFGVRKDYSNKSKKDGSITSCRFVCHKEGSREKHKNDYLIVNPRRETRTDCKARICFSFLNGKFRVKDFVEEHNHELHPAETTHMIASQRHISDIQQQEIELADDSGIQQRASHTLMKELSSHPTTKESGVRGAGCLLRYFEDQQSKNPAYFQTYQMDSEEQITNIFWADARMRLDYGYFGDVVSLDTTYCTNNAHRPLALFSGFNHHRGVVLFGAALLYDETTASFKWLFETFLKVHNKKNLKLFLPIKIKQWPKPYKRKFETWGILCCHALKVFEAYDVKKLHDQYILKRWTKEARTGIIYDAKGNESEDDPKLGRTLQYNSLCHELVNIASEVAGKEEEVSFIPMVMHEAMKKVMECRLEKRHETNERDDPIPLSRIDMPQPTGIKKRAGSKRRTRIKSRVELRHRNGKASKSMSQPIITLSQSEQSTDQSEGPISLGGPELGGDKL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3705 593 MobiDBLite consensus disorder prediction 509 593 - -
Sto5g3705 593 MobiDBLite consensus disorder prediction 556 580 - -
Sto5g3705 593 Pfam FAR1 DNA-binding domain 134 221 IPR004330 -
Sto5g3705 593 Pfam MULE transposase domain 326 390 IPR018289 -
Sto5g3705 593 MobiDBLite consensus disorder prediction 533 549 - -
Sto5g3705 593 PANTHER OS01G0852650 PROTEIN 403 486 - -
Sto5g3705 593 PANTHER OS01G0852650 PROTEIN 108 385 - -
Sto5g3705 593 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 403 486 IPR031052 GO:0006355
Sto5g3705 593 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 108 385 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3705 Sto-Chr5 45079417 45084555 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto5g3705 MULE 1.9e-11 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3705 - - cam:101507947 369.777