Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3701 ATGGAGAATGCAGGTGACAAGATGAGGTTTATTGAAGACCCCAAAGCCAGAAACGAAACCTTCTTGAAGTTAAAGGCTGAAATTTTGAAAGAATATAGCGAGCTTTCTGCCTTCTGTGGAGCAGAGTTTGCCGTTTTCTTTTACCATCGGGAGAAACTTACGCCTATGGCTACCCTTCTGTCGAGACCATTATTGACAGCTTGGTTGGAAGCTATACTTGCAATGGAGTCTGACCATACTCCTCTTATTCTTATATTTTCCAACCATACTCCTAAAACCTTGCTATGGTTGCTAACTTTTGGTGAAGTTCCTCTGATAAGAGTAATGGAGTGCATTGCTTTAGTATGGAAAAGCTCTGTAGGAACAAAAATCATGGTGGCATAG 384 0.4115 MENAGDKMRFIEDPKARNETFLKLKAEILKEYSELSAFCGAEFAVFFYHREKLTPMATLLSRPLLTAWLEAILAMESDHTPLILIFSNHTPKTLLWLLTFGEVPLIRVMECIALVWKSSVGTKIMVA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3701 127 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 49 IPR002100 GO:0003677|GO:0046983
Sto5g3701 127 Gene3D - 13 93 IPR036879 GO:0003677|GO:0046983
Sto5g3701 127 ProSiteProfiles MADS-box domain profile. 1 48 IPR002100 GO:0003677|GO:0046983
Sto5g3701 127 SUPERFAMILY SRF-like 7 51 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3701 Sto-Chr5 45045464 45047748 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Sto5g3701 SRF-TF 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3701 - K06145 sbi:8061325 40.4318