Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3684 ATGGTAGCACTTTCCAAGTTACCTTATCAGGAACAAACAAAGAGTACTTCCTCATCATATTTGCATTATTTTCAAATTCTGAAACTTCTGTTAAACTTACCAAGCTCAAACAACAAATTTGGTTCAATACTCTTGTCTGCTACTGCAACTGTAATCTCTCTGTTTGATGATTTTGAAGTCTTTGTTGATTTCAACATCTTCCCAGTGGAGATCCCTGCAACTCAAAACCAAGATGTTGATGCAACCAACGCCGGCATCAATGAGGAGCAACTAGCTCCTCGCGTAATTCTTCCACAATACCTCAGAATCTCTGAAGATGCCAAACAGACTCTCCAAGTTTGTGTCTCGGCATTTATTCGCTTCATCACTAATAAGCCTAATGAACGGTGTGAGCAAGACTGTCGCATAACAGTGACATCATATGACATACTTTGGGCAGTTAGGAATCTAGGCTTCAATGACTATGTGGAGCCTCTTACCACCTTTCTCAGTCGCCTTCGTGAGTCCGAAGGTGGCTATTATACCGCACATGGCCTGAACACACTGGCTCCTCAACAATTGCAAACTCTTCCACCGATGTCACAACCATTGGTACCACCATCACAAGGCCATTTTCTGTTGGACCCAAACCTTAATATGATGGGTGGTTCTTTTCATAGTGGTGGATTAGGTGAGAATACCTTAAGCAATGCTCCAATAAATGACAACCTATCCAATCAACATGAAACATAA 732 0.4167 MVALSKLPYQEQTKSTSSSYLHYFQILKLLLNLPSSNNKFGSILLSATATVISLFDDFEVFVDFNIFPVEIPATQNQDVDATNAGINEEQLAPRVILPQYLRISEDAKQTLQVCVSAFIRFITNKPNERCEQDCRITVTSYDILWAVRNLGFNDYVEPLTTFLSRLRESEGGYYTAHGLNTLAPQQLQTLPPMSQPLVPPSQGHFLLDPNLNMMGGSFHSGGLGENTLSNAPINDNLSNQHET 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3684 243 Gene3D Histone, subunit A 91 180 IPR009072 GO:0046982
Sto5g3684 243 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 147 IPR003958 -
Sto5g3684 243 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 94 203 - -
Sto5g3684 243 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 94 203 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sto5g3684 243 SUPERFAMILY Histone-fold 97 171 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3684 Sto-Chr5 44785649 44790480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3684 94 222 CCAAT-HAP3 Transcription Factor Family AT1G21970 38.462 7.32e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sto5g3684 CBFD_NFYB_HMF 7.9e-10 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3684 K08065 - thj:104811667 107.457