Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3682 ATGAAAGGTGGAGAAGAAAGTCTCTCATTTCCTTTTGGCCAGCACCAATATGAAAACCGTGCAGATTTCAACATCTTGCCAGTGGATATCCTTGCAACTCAAAACCAAGATGTTAATGCAACCAATGCCGGCATCAACGAGGAGCAACTAGCTCCTCACATTCTCCAAGTTTGTGTCTCGGCATTTATTCGCTTCATCACTAATAAGGCTAATGAACGGTGTGAGCAAGACTGTCGCATAACAGTGACATTTGATGACATACTTAGCGTAGTTAGGAATCTAGGCTTCAATGACTATGTGGAGCCTCTTACCACCTTTCTCAGTCGCCTTCGTGAGTCCGAAGGTGGCCATTATACCGCACATGGTCTGAACACACTGGCTCCTCAACATTTGCCTACTCTTCCACCAATGTCACAACCATTGGTACCACCATCATAG 438 0.4521 MKGGEESLSFPFGQHQYENRADFNILPVDILATQNQDVNATNAGINEEQLAPHILQVCVSAFIRFITNKANERCEQDCRITVTFDDILSVVRNLGFNDYVEPLTTFLSRLRESEGGHYTAHGLNTLAPQHLPTLPPMSQPLVPPS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3682 145 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 51 124 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sto5g3682 145 SUPERFAMILY Histone-fold 51 116 IPR009072 GO:0046982
Sto5g3682 145 Gene3D Histone, subunit A 14 124 IPR009072 GO:0046982
Sto5g3682 145 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 51 124 - -
Sto5g3682 145 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 51 91 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3682 Sto-Chr5 44761347 44762897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3682 55 115 CCAAT-HAP3 Transcription Factor Family AT5G47670 54.098 7.29e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3682 K08065 - mus:103977352 81.6481