Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3679 ATGGAGCCGTCAAAGGTGGAAAGGGTTATCAATGGACCAGTGTCGATAGAGTGGGCCATGCTGAATATTGGAAGTTATTTCAACATCTTGCCAATGGAGATCCTTGCAAATCAAAACCAAGATGTTCATGCAACCAACGCTGGCATCAACGAGGAGCAACTAGCTCCTCACACTCTTCACGTTTGTGTCTCGGCATTTATTCGCTTCATCACTAATAAGGCTAATGAACGGTGTGAGCAAGACTGTCGCATAATAGTGACATCAGATGACATACTTTGGGCAGTTAGAAATCTAGGCTTCAATGACTATGTGGAGCCTCTTACCACCTTTCTCAGTCGCCTTCGTGAGTCCGAAGGTGGCCATTATACTGCACATGGCCTGAAGCCGCTGGCTCCTCAACATTTGCCTCCTCTTCCACCAATGTCACAACCATTGGAACCACCATCACAAGGCCATTTTTTATTGGACCCAAACCTTAATATGATGGGTGGTTCTTTTCATAGTGGTGGATTAGGTGAGAATACCTTAAGCAATGCTACAATAAATGACAACCTATCTAATCAACATGAAACATAA 576 0.441 MEPSKVERVINGPVSIEWAMLNIGSYFNILPMEILANQNQDVHATNAGINEEQLAPHTLHVCVSAFIRFITNKANERCEQDCRIIVTSDDILWAVRNLGFNDYVEPLTTFLSRLRESEGGHYTAHGLKPLAPQHLPPLPPMSQPLEPPSQGHFLLDPNLNMMGGSFHSGGLGENTLSNATINDNLSNQHET 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3679 191 Gene3D Histone, subunit A 28 128 IPR009072 GO:0046982
Sto5g3679 191 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Sto5g3679 191 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Sto5g3679 191 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Sto5g3679 191 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 55 160 - -
Sto5g3679 191 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 55 160 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sto5g3679 191 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 55 95 IPR003958 -
Sto5g3679 191 SUPERFAMILY Histone-fold 55 120 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3679 Sto-Chr5 44737323 44738340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3679 55 170 CCAAT-HAP3 Transcription Factor Family AT1G21970 36.641 8.43e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3679 K08065 - thj:104811667 90.8929