Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3650 ATGAAGTCATCAAATATCTGGATTCGACGTCCACAATGCCCATGTGGAGATTGGAAGTGTTTTATTAAATATGATGGAGAAGATCAGATATCAGTAAGATCTCAGCCTATAAAGACTGAGACAGTGCCTTCATCATCATCGGAAACTGTCTTCACTCCTTATGTGGGTCAAATATTCAAAAGTGATGATGATGCATTTGAATACTATAGCAGCTTTGCCCGGAAGAATGGGTTTTCAATCAGAAAGGCACGCTCAACAGAAAGTCAAAATTTAGGAATATATAGAAGAGATTTTGTTTGTTACAGGTCCGGATTTAATCAACCAAGAAAAAAGGCCAATGTGGAGCATCACAGAGAGCGGAAATCTGTACGATGTGGATGTGATGCAAAACTGTACTTGACTAAGGAAATTGTTGATGGTGTTACTCAATGGTATGTGTCACAATTTAGTAATGTTCATAACCATGAGTTGTTggaagatgaccaagtccgTCTTCTACCTGCATACCGAAAAATACATGAGGCTGATCAAGATCGTATTCTTCTACTCTCCAAGGCTGGGTTCCCAGTGAACAGAATTGTGAAGGTTTTAGAACTGGAAAAAGGAGTTCAGCCTGGACAGCTTCCCTTCATAGAAAAGGATGTTAGAAATTTTGTTCGGACTTGCAAGAAAGCAGTTCAAGAAAATGATGCTTTACTGactgaaaaaagagagaatgatATGCATGAACTTGTGGAGACCTGTAAGGCAATCATAGACAAGGAtcccaattttatttttgattacACTACTGATGAAAATGGCAAAGTTGAAAACATAGCTTGGTCATACGGTGAATCTGTCCGTGCCTATTCTGTTTTTGGTGATGTAGTTACTTTGGACACCACATACCGTTCTGTTACATATGAATTGCTTCTTGGAGTGTTGTTTGGTATAGATAATAATGGAAATGCAGTAATATTTGGGTGTGTGTTGTTACAAGATGAAAGTTCTTATTCATTTGCCTGGGCTTTACAGACTTTTGTTCGATTTATGAGAGGGAGACATCCTCAGACAATTTTAACTGACATAGATCCAGGCCTGGGAGAGGCTATTGCCAAGGAGTTGTCTGAAACTAAACATGTCATACGCATGTGGCATATTCTATCAAAAATATCAAATTGGTTCTCTATTCCCCTAGGATCACAATATGCAGATTTTAGGGTGGAATTTGATATATTGTGTCACCTGGAGAGCATAGAAAACTTTGAACATCAGTGGGATCTTTTTGTAGCTCGATTTGGACTTGCATCAGACAAGCATATAGCTTTGCTATTCTCATTTCGAGCATCTTGGCCACTATGCTATGTTAAAAGTTATTTTGTAGCTCGTTCTTTGACAGTTGAGTTTTCACAATCATTAGATTCAATCTTGAAAAAGATTTTTGATTCACAAACTTGTCTCCAAGCATTCTTTGAGCAGGTAGGTATTGCCGCCAAGTCGTCAGTATTTACAAAAGAAGGGATACATTACATGGGTATAAAGACATGCATGCCTATTGAAGAACATGCAAGCAATATCCTTACACCTTATGCTTTTAATGTGTTCCAACATGAAATTGTGCAGTCATTGCAATATGCAACAACAGAACTGGCCAATGGATCATACCTTGTTCAGCACTATAAGAAAATGGACGAAGAGCGTCTCGTAATTTGGGTGCCGGATGATGAGGAAATTCAGTGTTCCTGTAAGGAATTTGAACATTCTGGAATATTGTGTCGGCATTCGATTCGTGTACTTACAGTGAAGAACTGCTTTCAACTGCCTACAAAATATTTGCTCCCTCGATGGCGACACGAAAGTTCGTTGGCTCCTATCGATGAACAAAACCCTCGAAGCAGCATCGATGAGTGCGCTCAAGCCTTCCATTCTTTGGCAGCCACTTTGCTGACAGAATCATTGATGTCCAGAGAAAGATTTAGTTATATTCATAGAGAACTCACAGGGATTCTTGAGCATGTTAAAAATATGGAAGTTACCGATGAATATGCTATCAATGTGGCAGCTAATAATTTTGGTGGATCTTAG 2067 0.3783 MKSSNIWIRRPQCPCGDWKCFIKYDGEDQISVRSQPIKTETVPSSSSETVFTPYVGQIFKSDDDAFEYYSSFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIHEADQDRILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKAVQENDALLTEKRENDMHELVETCKAIIDKDPNFIFDYTTDENGKVENIAWSYGESVRAYSVFGDVVTLDTTYRSVTYELLLGVLFGIDNNGNAVIFGCVLLQDESSYSFAWALQTFVRFMRGRHPQTILTDIDPGLGEAIAKELSETKHVIRMWHILSKISNWFSIPLGSQYADFRVEFDILCHLESIENFEHQWDLFVARFGLASDKHIALLFSFRASWPLCYVKSYFVARSLTVEFSQSLDSILKKIFDSQTCLQAFFEQVGIAAKSSVFTKEGIHYMGIKTCMPIEEHASNILTPYAFNVFQHEIVQSLQYATTELANGSYLVQHYKKMDEERLVIWVPDDEEIQCSCKEFEHSGILCRHSIRVLTVKNCFQLPTKYLLPRWRHESSLAPIDEQNPRSSIDECAQAFHSLAATLLTESLMSRERFSYIHRELTGILEHVKNMEVTDEYAINVAANNFGGS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3650 688 ProSiteProfiles Zinc finger SWIM-type profile. 562 597 IPR007527 GO:0008270
Sto5g3650 688 Pfam FAR1 DNA-binding domain 67 158 IPR004330 -
Sto5g3650 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 669 IPR031052 GO:0006355
Sto5g3650 688 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 669 - -
Sto5g3650 688 SMART 26again6 572 599 IPR006564 GO:0008270
Sto5g3650 688 Pfam SWIM zinc finger 566 596 IPR007527 GO:0008270
Sto5g3650 688 Pfam MULE transposase domain 290 383 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3650 Sto-Chr5 44193421 44195830 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto5g3650 MULE 5.2e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3650 - - pvy:116123071 1126.31