Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3578 ATGTCGTTATGGATCAACTACAACACGTATGGAGTACTTCGAAGCGCCGGTCGACACGGCGGTTGCGACTTTACGAATGGATCGTATAGAAGCGTCCCTTGTAGCCATAAAGAAAAGGTGGATGCTCTCACTCATAGCATCGATTGTGGACTTTCTCCGTTGGATGGCTTGCACAAGAATGTTGAATCTACAATGCCAACCGATGCGCCACTTGCCATTGTTGCTATAGATATGGAGGACTCTATCATGTCCAAGGTTCTCTCACAGCTAGAATCTTGCGAAGATGCACAAGATGAGGCGGTGTGCGATTCTCAGATTTTCGATTCTTATCCAACACGGCCACTCATGGATGAGGATAAAGGACTCCAAATAGGTGTGACGACAGATTTAGAAAACCAAGAAGAAGCATACTGCAGTGTTTTTGTTGATGTATATGGTGCAGGGGATGCAAATGAGGTACACAAATCAAAAGCAAATGTTTCCCTTCATCATCATGTATTCTCTTCCTTTCCTAGTGCGTTTTGCAAGGAAGAAGCAAACACCATTTCAGAATTAACATTTGATCCTGGTGGAAATTACTATATGGCGCATCTACTATCCTGTATCCTTGATATGAGCTCAACATATTTGAGACAATGCTTGATGATTTGCACACACAAATTGAGAACTGATATGATTTCTTCATTGTTTAACATGGATGAGCTTACTGATCAAGTTGCAGTGTTTGGCTTACTTCTTGTTTCACATGCCCACAATTTGTTTGATGAATGGCATAGAAGTCACAGGAAATTAGTTAAGGaatttattagaattgttgCATTAATTCTTCCATGgaactatattttattattgtctaTGTGGACCGTCGTTACTACCTTGAGTGTTGGTTGTACTACAATAATTCATCCATCTCAATTTCCAACTACTGTTTTTGAGAATATTGACCTTGGAAGAGATGACTTGGGTGTGGGTATGAGACTTCATAAGAGGGTAATGAAATGTGACCTTGGTACTGTTGCTTGGATGGCTATGTTAACTGACCATCCTCAATCAGGATTTTACCAAGAAGCCTTGTCTCTCtttattaacatgaaaatcttCCATTCTAGACCTAATCACTTCTCATTGTTGGTGATATTAAAAGCATGTGCCAGTATGGGCCATTTTCATTTTGGAACTAGAATTCATGCTTTGTTTGTTGCTTCAGGGTACGTATATTCTCTCCCTGGTTGTAACTCGCCGATTGATAAGTATGGGAAGTGTTTGAGTTCATCTAATGCAAGAATAGTGTTTGATGAGATGAGTAGTGGGCAAGAAAGGACACTGACATGGTGTTCACTCCCATTTGCAAATATAAATCCTTCTTTGTTTAGCATGGCGAGTGAATTGTGCCATAGGATGCTTGTAAGGATTGCAATTGCTTGGAACATAATGATTGTGGAATATGCTCAGTGGAGAAAAGTTGAAGAATTCTTTCAAGTATTTTGGAATGCCATCATTGACGCCTTTATGGAAATGGTCAACACCCAAGAATTTTTTCATGCTTCTCAGCAATTTCTGGAGAGAAAGGTTGTATCTATGGTTGCATGGTATACAAGAAATGGTAGCAAAGGAATCTTTGAGAACTTCATTGATCTACGTACAGCTTCTTGGATATTCATAATGCTACTACAACATGCATTTCTTGGTTACGACTTAGAGACATTAGTTTTGTTGTGCAAGAAACTTCTGATTTGGAATTATGATGgttcaattatttttatatatgatcCCGGTGGTGTCTTTTCGCTTCTTCAAGAGGAAGTTCCTTCAATGGTTTTACTTCTTATATCCTCAATGGTACCAACATTGCCAAAATTGTTATTATCATGCAGTAACTGCACTGAGATATCTTGTTACAACATGGACATAAATAAATATGCTATTATGGTCTTTGATTCCGGAATCCATAATTCTTCTTGTATTATGATGAATCATGATGTTCATTTTCATGACCATGCTATGAAGAATTCTATGATTTTGAGTGTTGGTGACAAGAGAATGAGCCCATCTTTGGTACAGAGGGTAGCCAACgcaaatataaagaaaattgagATGTTATATGCTGATGTATGGGAAGAAAGGAAGGTAAAGGAAGTTATTCATCAACTATGTGAAATAAGAATGGTAGTTTTGGCTGCACCATCATCATTGTATCTTGCCATCCTTCACAACCTTGAAGTCCATAAGCTTATCAATCAAATGCTTAAGAATGTGAGTCTgaatttttcttcttccatcaaccttgaggacaaggttcCTTTAAAAGGGGGAGGCAATGTAATGATCTTGGACTACAAGGCTGGCCCAAGTGAGATGGCCCAAACTTAA 2370 0.37 MSLWINYNTYGVLRSAGRHGGCDFTNGSYRSVPCSHKEKVDALTHSIDCGLSPLDGLHKNVESTMPTDAPLAIVAIDMEDSIMSKVLSQLESCEDAQDEAVCDSQIFDSYPTRPLMDEDKGLQIGVTTDLENQEEAYCSVFVDVYGAGDANEVHKSKANVSLHHHVFSSFPSAFCKEEANTISELTFDPGGNYYMAHLLSCILDMSSTYLRQCLMICTHKLRTDMISSLFNMDELTDQVAVFGLLLVSHAHNLFDEWHRSHRKLVKEFIRIVALILPWNYILLLSMWTVVTTLSVGCTTIIHPSQFPTTVFENIDLGRDDLGVGMRLHKRVMKCDLGTVAWMAMLTDHPQSGFYQEALSLFINMKIFHSRPNHFSLLVILKACASMGHFHFGTRIHALFVASGYVYSLPGCNSPIDKYGKCLSSSNARIVFDEMSSGQERTLTWCSLPFANINPSLFSMASELCHRMLVRIAIAWNIMIVEYAQWRKVEEFFQVFWNAIIDAFMEMVNTQEFFHASQQFLERKVVSMVAWYTRNGSKGIFENFIDLRTASWIFIMLLQHAFLGYDLETLVLLCKKLLIWNYDGSIIFIYDPGGVFSLLQEEVPSMVLLLISSMVPTLPKLLLSCSNCTEISCYNMDINKYAIMVFDSGIHNSSCIMMNHDVHFHDHAMKNSMILSVGDKRMSPSLVQRVANANIKKIEMLYADVWEERKVKEVIHQLCEIRMVVLAAPSSLYLAILHNLEVHKLINQMLKNVSLNFSSSINLEDKVPLKGGGNVMILDYKAGPSEMAQT 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3578 789 Pfam Aldehyde dehydrogenase family 268 306 IPR015590 GO:0016491
Sto5g3578 789 PANTHER BNAC04G08260D PROTEIN 335 469 - -
Sto5g3578 789 PANTHER BNAC04G08260D PROTEIN 412 536 - -
Sto5g3578 789 SUPERFAMILY ALDH-like 262 349 IPR016161 GO:0016491
Sto5g3578 789 PANTHER - 412 536 - -
Sto5g3578 789 PANTHER - 335 469 - -
Sto5g3578 789 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 234 312 IPR016162 GO:0016491
Sto5g3578 789 Gene3D Tetratricopeptide repeat domain 338 545 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3578 Sto-Chr5 43063246 43065969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3578 264 349 Aldehyde Dehydrogenase Gene Family AT3G48170 39.080 4.36e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3578 - - ccaj:109809253 154.066