Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g3539 ATGTCACTAAGTGAGATTGGGGAATTGCATTGTGGTATTGATGAGAGgttgaagaagaaaggagggTATGGCATTGAGGAAGCAGAGAAGTTGCTTCAATTTGGTCTAGTATGTGTGAATGAAGAGCCTTGTGTGAGACCCACAATGAGGCAAGTTGTGAAAGTGCTGGAGGGAGAAATTGAAGGGAAGGATAAGGATTGTTGTGAAGAGGAGATGGAGGAAGAGAGTTTGCTTGAGAAAATAGAACCAGAACCGCAGAACCATGACGCAGCGAAGGAGTTAGTGCGTCGTGAAGAGAAAACCGAGTCGGTGCGTCGTTGTGAAGAGCTGCACCCAGTTAGTGCGTTGGTTCGTCGGCGAGCTGAAGCAGTGGTGCGTCGTGGACTTGATGAtttattggtcgcttctctgtctctctctcaacctctcaaacactctcatcggcggcaaaaactctcaccatcgaaggaggatccatggccatcggacagatctctcggtgccgtcgtctcgttgcatcagatctctcggcgccatcGTCTCGTtacagcagatcttgccggagaaaacgcagaagtgcttctggagagtgaaggagaagaagcctccgccgccgcgaaagtggaagtgtttggtttggagtttattggtcgcatctctctctctcgatcaacctctcaaacactctcatcggcggcaaaaactctcaccatcgaaggaggatccatgccaccggacagatctctcggcgccgtcgtctcgttgcatcagatttCTCGATGCCGTCGTCTCTTTGCAGCAGaacttgccggagaaaacgcagaagtgcttcgggagagtgaaggtgAAGAAGCCTCTGctgccgcggaagaggaagtgtttggtttggagTCTTCCACCATACCGTCCCTTGCGTCGTCGAATACCATCGTTCTTGGATGCCCGAATGATGACAAGGCCACAGAAGCAACTATTGATGCAGAGGATTATCTTCATACTGGTGATATTGGCTACATAGATGCCGACGATGAGATTttcatagttgacatagttaaggaACTCATCAAATTCAAAGGCTTTTAG 1083 0.2585 MSLSEIGELHCGIDERLKKKGGYGIEEAEKLLQFGLVCVNEEPCVRPTMRQVVKVLEGEIEGKDKDCCEEEMEEESLLEKIEPEPQNHDAAKELVRREEKTESVRRCEELHPVSALVRRRAEAVVRRGLDDLLVASLSLSQPLKHSHRRQKLSPSKEDPWPSDRSLGAVVSLHQISRRHRLVTADLAGENAEVLLESEGEEASAAAKVEVFGLEFIGRISLSRSTSQTLSSAAKTLTIEGGSMPPDRSLGAVVSLHQISRCRRLFAAELAGENAEVLRESEGEEASAAAEEEVFGLESSTIPSLASSNTIVLGCPNDDKATEATIDAEDYLHTGDIGYIDADDEIFIVDIVKELIKFKGF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g3539 360 Pfam AMP-binding enzyme 307 357 IPR000873 -
Sto5g3539 360 MobiDBLite consensus disorder prediction 144 163 - -
Sto5g3539 360 Gene3D Luciferase; Domain 3 302 349 - -
Sto5g3539 360 SUPERFAMILY Acetyl-CoA synthetase-like 310 360 - -
Sto5g3539 360 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 309 360 - -
Sto5g3539 360 PANTHER 4-COUMARATE--COA LIGASE 2 309 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g3539 Sto-Chr5 42358301 42368051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g3539 316 360 Monolignol Biosynthesis Gene Families AT1G65060 75.556 1.76e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g3539 K01904 - adu:107462120 81.2629