Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g2610 | ATGGAGAACTCGagtgagaagaagaagcaggGGATGATTCAAGACGACCTCAAAGCTATAAATGCCGCGTTCTTAAAGCTGAAGTCTAAAATTTTGGAAGAAGCTATCGAGCTTTCTATTCTGTGTGGAGCAGAGTTAGCCATTTTCCTCGCTTCCTCTTCCGGTGAAATTCATTGCTTCGCTAACCCTTTTGCTGATACCATAATTAACCGATATACTTCTACAAACATCGATACCATCATCAAAAAAGAAGGTGACTCTCCTTGTTCAAGCATGTCTCATTCGCAGACTCTGACTGATTGTGATAAGGATAAGCAACGTGATTTGGATGCTCAAGTGGAAGCAGAGAAAATTTCCATTCACCTCTTGTTTCAATATATGATGGATAAGAGTTTAGAAATCTctaaataa | 411 | 0.3698 | MENSSEKKKQGMIQDDLKAINAAFLKLKSKILEEAIELSILCGAELAIFLASSSGEIHCFANPFADTIINRYTSTNIDTIIKKEGDSPCSSMSHSQTLTDCDKDKQRDLDAQVEAEKISIHLLFQYMMDKSLEISK | 136 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g2610 | 136 | PRINTS | MADS domain signature | 26 | 41 | IPR002100 | GO:0003677|GO:0046983 | |
Sto5g2610 | 136 | PRINTS | MADS domain signature | 41 | 62 | IPR002100 | GO:0003677|GO:0046983 | |
Sto5g2610 | 136 | Gene3D | - | 18 | 88 | IPR036879 | GO:0003677|GO:0046983 | |
Sto5g2610 | 136 | ProSiteProfiles | MADS-box domain profile. | 24 | 64 | IPR002100 | GO:0003677|GO:0046983 | |
Sto5g2610 | 136 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 22 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Sto5g2610 | 136 | SUPERFAMILY | SRF-like | 21 | 77 | IPR036879 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g2610 | Sto-Chr5 | 22491285 | 22492321 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto5g2610 | 15 | 102 | MADS-box Gene Family | AT3G57390 | 29.670 | 1.29e-07 | 47.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MADS-M-type | Sto5g2610 | SRF-TF | 1.3e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g2610 | - | - | qsu:111983682 | 56.9954 |