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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sto5g2574
CTGGAGAACTCGagtgggaagaagaagaagcagggcATGATTCAAGATGACCTCGAAGCTAGAAATGCCGCGTTCTTAAAGCTGAAGTTTGAAATTTTCGAAGAAGCTATCGAGCTTTCTATTCTGTGTGGAGCAGAGTTAGCCATTTTCCTCGCTTCCCCTTCCGGTGAAATTCATTGCTTCGCTAACCCTTCTGTTACTGCCATAATTAACCGATATACTTCTACAAACGTCGATACCATCATCAAAAAAGAAGGTGACTCTCCTTCTTGTTCAAGCATGTCTCATTCGCAGACTCTGACTGATTGTGATAAGGATAAGCAACGTGATTTGGATGCTCAAGTGGAAGCAAAGAAAAGTaagaagTTTCCATTCACTCTTGTTTCAATATATGATGGATAA
402
0.3756
LENSSGKKKKQGMIQDDLEARNAAFLKLKFEIFEEAIELSILCGAELAIFLASPSGEIHCFANPSVTAIINRYTSTNVDTIIKKEGDSPSCSSMSHSQTLTDCDKDKQRDLDAQVEAKKSKKFPFTLVSIYDG
133
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sto5g2574
133
PANTHER
MADS BOX PROTEIN
12
122
-
-
Sto5g2574
133
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
19
61
IPR002100
GO:0003677|GO:0046983
Sto5g2574
133
SUPERFAMILY
SRF-like
7
81
IPR036879
GO:0003677|GO:0046983
Sto5g2574
133
Gene3D
-
18
98
IPR036879
GO:0003677|GO:0046983
Sto5g2574
133
PANTHER
AGAMOUS-LIKE MADS-BOX PROTEIN AGL61
12
122
-
-
Sto5g2574
133
ProSiteProfiles
MADS-box domain profile.
5
65
IPR002100
GO:0003677|GO:0046983
Sto5g2574
133
PRINTS
MADS domain signature
42
63
IPR002100
GO:0003677|GO:0046983
Sto5g2574
133
PRINTS
MADS domain signature
27
42
IPR002100
GO:0003677|GO:0046983
Sto5g2574
133
SMART
madsneu2
5
64
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sto5g2574
Sto-Chr5
22092653
22093669
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sto5g2574
21
109
Type I MADS-box Gene Family
AT2G24840
30.851
4.80e-10
53.9
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Sto5g2574
SRF-TF
2.4e-09
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sto5g2574
-
-
egt:105948920
65.855
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