Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2572 ATGATTCAAGACGACCTCGAAGCTAGAAACGCCGCATTCTTAAAGCTGAAGTTTGAAATGTTCGAAGAAGCTATCGAGCTTTCTATTCTGTGTGGAGCAGAGTTAGCCATTTTCCTCGCTTCCTCTTCCGGTGACTCTCCTTGTTCAAGCATATCTCATTCGCAGACTCTGACTGATTGTGATAAGGATAAGCAACGTGAGTTAGATGCTCAAGTGGAAGCAGAGAAAAGTaagaaggttgaataa 246 0.4106 MIQDDLEARNAAFLKLKFEMFEEAIELSILCGAELAIFLASSSGDSPCSSISHSQTLTDCDKDKQRELDAQVEAEKSKKVE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2572 81 MobiDBLite consensus disorder prediction 57 81 - -
Sto5g2572 81 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 7 44 IPR002100 GO:0003677|GO:0046983
Sto5g2572 81 Gene3D - 6 76 IPR036879 GO:0003677|GO:0046983
Sto5g2572 81 MobiDBLite consensus disorder prediction 42 81 - -
Sto5g2572 81 MobiDBLite consensus disorder prediction 42 56 - -
Sto5g2572 81 ProSiteProfiles MADS-box domain profile. 4 44 IPR002100 GO:0003677|GO:0046983
Sto5g2572 81 SUPERFAMILY SRF-like 6 52 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2572 Sto-Chr5 22078125 22078460 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Sto5g2572 SRF-TF 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2572 - - mbr:MONBRDRAFT_37624 44.669