Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2466 ATGGAAGCAAACAAAGAGGAGGCGCTTAGAGCAATAGAGAATGCTGAGAAGCGATTTGCTCTGAGAGACTTTGCAGGTGCAAAAAGTTATGCATTAAAGGCGAAGACAATTTGTCCAGGATTGGAGGGAATACCTCAAATGGTGGCCACATTTCAAGTTTATGTTGCTTCTGAGGTTAGATATAATGGTGAACTAGATTATTATTCAATTCTTGGAATAAAACCTTCAGCAGATAAAGAGACTGTCAAGAAACAGTATAAGAAGTTGGCTGTGTTGCTCCACCCAGATAAGAACAAATGTGTTGGTGCTGATGGGGCCTTCAAGCTTGTATCTGAAGCATGGAATTGGCTGTCAGATAGTTCTATGCGAAGTTCTTATGATCTCAAGAGAAATGCACAATTGGCTGCCGGAATTAATCAAGCCAATTTGTCATCAGTACCTGCTGCAGGAACTACAGGTTATAACAAATGTTTCAATTTATCAACCTCTCATGGTAGGAGTGACACTTTCTGGACCATTTGCACCTCTTGTAAAGTTCAGTATGAGTATCTGCGCAAGTATGTCAACAAGAGACTTTCATGTAAGAACTGCCGTGGAACTTTCGTTGCTTCTGAAACTGGAGCAGCCCCAGCAAATGGTTCGTTCCCATACTGCCCTTGGTCTTATGTGCCAGGCAATGGTTATGGAAGCCATTCATTTGAAAATGTCACATATGTACCTACTAGTACTACCTACTTCAATGGAAATGGGGTTACTGGATACCACTCTCCACATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGAGCTCTGCTGGGCATGTCAATCAAAATGGTTCAACAACCTTATCTACTGATTCTGTTTATAAGGCCAATGGAAACGGGAAGAGAGGAAGACCAAGAGTCAAACCGGGAGTTGATTTGAGGCATCAGGTGGTAGAGACTGCAGTTAATGTAAATTCAGATGCATCATTCTACTCTATTGAACCACAGGAAATAAAGCTCACTAGACCTGATAAAAAGAGGAAAGTAGTTGTGGGAGCCACTCTCACAAATGGCTCTGAGGAAAAGGAATCTAGACTTACTTCTGAATCAAGACTGGCTGATGGCAATGAAAGCATTGGTCATGGCCAGAAGCTTCCTTGCACGACTGAAGTTCAAACTAAACAGTATTCCATGGCACCAGCATTTGATGCTAGAAAGTTACTGATTGATATGGCCAGGACTGAAATTCTGAAGAAACTTGAAGAGATAAAGTTGGCATCTGAAGCTGCTGCTATTGAGGAGAAAGCAAAAACACAAGCAGAAGTTGGTCAAGTCAAAAGAGGGGAATGTAGAAGAGCAGGTGTAAATGTTTCTGGCCATCAATTAGAGCACGGAAAAGATGTTCCTATCTCAATAACTGTGCCAGATTCTGACTTTCATGATTTCGATAAAGATAGATCAGAGGAATGTTTCAGGCCAAAGCAAATATGGGCTTTATATGATGAGGATGATAGCATGCCTCGTTTATATTGTCTGATCCGCGAGGTCATCTCTGTCAACCCATTTAAGATTCATATTAGTTATTTGAACTCCAAAACTGATAGTGAGTTTGGCCAAGTGAACTGGCTAGATTCTGGTTTTACCAAATCTTGTGGAAATTTCAGGGCCTGGAATTCTGATGTTGTTGATcaagttaatattttttctcaTGTTCTATCCCGGGAGAAGGCTGGTCGAGGTGGTTGTATTCGGATATATCCCAGAAGTGGAGATATTTGGGCAGTTTATCGAAATTGGTCACCAGATTGGAACAGATCTACCCCAGATGATGTGAGGCACCAGTATGAAATGGTGGAGGTTCTTGATGATTACTCTGAGGAGCTTGGTGTTTGTGTTAGTCCCCTTATAAAGCTGGCTGGCTATAAAACAGTATATCAGACAAATACTGACAAAAGTGCCATCAGATGGATACCGAGAAGAGAAATGTTACGCTTTTCACACCAAGTGCCTTCTTGGTTGCTTAAGGGAGAGACAAACAATTTGCCAGAGAGTTGTTGGGACCTTGATCCGGCAGCAACTCCAGATGAACTTCTTCATGacgctgctgctgctgctgctgctgcaaaTGCTTTGTAG 2124 0.4077 MEANKEEALRAIENAEKRFALRDFAGAKSYALKAKTICPGLEGIPQMVATFQVYVASEVRYNGELDYYSILGIKPSADKETVKKQYKKLAVLLHPDKNKCVGADGAFKLVSEAWNWLSDSSMRSSYDLKRNAQLAAGINQANLSSVPAAGTTGYNKCFNLSTSHGRSDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVASETGAAPANGSFPYCPWSYVPGNGYGSHSFENVTYVPTSTTYFNGNGVTGYHSPHGYEYVSNVSFQWSSAGHVNQNGSTTLSTDSVYKANGNGKRGRPRVKPGVDLRHQVVETAVNVNSDASFYSIEPQEIKLTRPDKKRKVVVGATLTNGSEEKESRLTSESRLADGNESIGHGQKLPCTTEVQTKQYSMAPAFDARKLLIDMARTEILKKLEEIKLASEAAAIEEKAKTQAEVGQVKRGECRRAGVNVSGHQLEHGKDVPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEDDSMPRLYCLIREVISVNPFKIHISYLNSKTDSEFGQVNWLDSGFTKSCGNFRAWNSDVVDQVNIFSHVLSREKAGRGGCIRIYPRSGDIWAVYRNWSPDWNRSTPDDVRHQYEMVEVLDDYSEELGVCVSPLIKLAGYKTVYQTNTDKSAIRWIPRREMLRFSHQVPSWLLKGETNNLPESCWDLDPAATPDELLHDAAAAAAAANAL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2466 707 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Sto5g2466 707 Pfam DnaJ domain 66 127 IPR001623 -
Sto5g2466 707 SMART dnaj_3 65 122 IPR001623 -
Sto5g2466 707 SUPERFAMILY Chaperone J-domain 57 131 IPR036869 -
Sto5g2466 707 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Sto5g2466 707 MobiDBLite consensus disorder prediction 282 302 - -
Sto5g2466 707 CDD DnaJ 66 119 IPR001623 -
Sto5g2466 707 PRINTS DnaJ domain signature 68 86 IPR001623 -
Sto5g2466 707 PRINTS DnaJ domain signature 86 101 IPR001623 -
Sto5g2466 707 PRINTS DnaJ domain signature 102 122 IPR001623 -
Sto5g2466 707 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Sto5g2466 707 Gene3D DnaJ domain 55 148 IPR036869 -
Sto5g2466 707 MobiDBLite consensus disorder prediction 355 380 - -
Sto5g2466 707 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Sto5g2466 707 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2466 Sto-Chr5 20450957 20453080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2466 4 305 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.212 1.76e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2466 - - gmx:100792639 1154.43