Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2338 ATGGGAATTAAATGCTCCAGACTCCTGCCATGTTGTGTGAATTCTCAAGTTAAGGCTTCTGTTCTTGAAGCTCCAGATGCTAAAAACGAGGATAGGAGTGAGGCCAATAACTGGCCTGCATTCCATGAATTTTCATTTGAGCAACTAAAGAATGCAACATCTGGTTTTGCTATTGAGAATATTGTCTCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGAAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGCTTTAATAGAAATGCTTGGCCTGATGATCGGCAATTTTTGGAGGAAGCAAGATCTGTTGGTCAACTCCGCAACCAGCGATTGGCAAATTTGATTGGTTGTTGTTGTGAAGGTGATGAGAGGTTGCTTGTGGCAGAATATATGCCAAATGAAACCCTAGCAAAACACCTGTTTCATTGGGAAACACAACCCATGAAATGGGCAATGCGACTAAGAGTTGTTTTACATCTTGCACAAGCTCTAGAATACTGCACAGGCAAAAGACGTGCCCTCTATCATGACCTTAATGCATATAGAGTTTTATTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCGGAGTATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGCACTCTTTTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTGATCCGGGACAGAAACCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTACGATTAGCATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCAAATCCAAAATCGTTGGTGGCTGCTTTGGCTCCACTTCAGAAAGAAACCGAGGTTCCTTCACATGTTTTGATTGGTATCCCACACAGTGCTGCTACTTTTGCTTCATTGTCCTCGCTTGGTGAAGCATGCTCAAGAAAGGACTTAACTGCCATAcatgaagttttggaaaataTTGGCTATAAAGATGATGAAGGAGTAACAAATGAGTTATCATTCCAGCTATGGACTGACGAAATGCAGGAGACACTTAATTGTAAGAAAAAGGGTGATGTTGCTTTCCATCAGAAGGATTTTAGACTTGCAATTGAGTGCTACACGCAGTTCATCAATGGTGGAACAGTGGTTTCTCCAACAGTCTATGCACGGCGTAGTTTTTGTTATCTCATTAGTGACATGCCTCGGGAAGCGCTGAACGACGCAATGCAAGCACAAGTCATATCCCCTGTATGGTACATTGCATCTTATCTTCAATGTCTTGCCCTCTCTGGTGTTGGTATGGAGAATGAAGCTCAAGTGGCACTTAAAGAGGGTACAACTTTGGAAGCCAAGAGGAATGAAACTTCTAGACAAAAGTGA 1479 0.4178 MGIKCSRLLPCCVNSQVKASVLEAPDAKNEDRSEANNWPAFHEFSFEQLKNATSGFAIENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDDRQFLEEARSVGQLRNQRLANLIGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGKRRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLIGIPHSAATFASLSSLGEACSRKDLTAIHEVLENIGYKDDEGVTNELSFQLWTDEMQETLNCKKKGDVAFHQKDFRLAIECYTQFINGGTVVSPTVYARRSFCYLISDMPREALNDAMQAQVISPVWYIASYLQCLALSGVGMENEAQVALKEGTTLEAKRNETSRQK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2338 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Sto5g2338 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Sto5g2338 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g2338 492 SUPERFAMILY TPR-like 384 482 IPR011990 GO:0005515
Sto5g2338 492 PANTHER LRR RECEPTOR-LIKE KINASE 1 491 - -
Sto5g2338 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Sto5g2338 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Sto5g2338 492 Gene3D Tetratricopeptide repeat domain 381 492 IPR011990 GO:0005515
Sto5g2338 492 SUPERFAMILY Protein kinase-like (PK-like) 33 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2338 Sto-Chr5 18382711 18387996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2338 10 329 Glycoside Hydrolase AT3G07070 33.621 5.62e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto5g2338 PK_Tyr_Ser-Thr 5.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2338 K14500 - gmx:100781311 896.73