Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2252 ATGAggaaaagggagagggaaaatCCTTGTGGGGTTTGTGGCCACTATCACAAGTACGAAGAAGGCGAGGTCTGTTCGATTTGCGGCCACCGCATTCCGGCGGCATCGGAGAAAAATTCAGTCCGGGTCAGCGCTTTTCCTTCGGTGATTTTGCCGGAGTTCCTTTACTTGGGCAGCTACGATAACGCATCACGCTCAGAGCTTCTCAAGACTCAGGGAATCTCTCGAATCCTCAATGTAAGGCAGACGGTTCCTTCTTGTCAAAATCTCTACAGAAACTCATTTACCTATCACTGCCTCCCAGATGACAAAACTTTGCCATTTGATGAAGCGATTCAGTTTCTAGAGCAATGTGAGAAGGACAAGGCAAGGGTTCTGGTTCATTGCATGTCAGGAAAGAATAGGTCTCCAGCTATTGTGATTGCTTACCTGATGAAGTCCAAAGGATGGAGACTTGCCCAGAGTTACCAGTGGGTAAAAGAGCGGAGACCTTCTGTTGAATTAACTGAAGGTGTCCACCAGCAACTGCAGGAGTATGAGCACAAGATCTACGGATCGGTCGATACTGGCAGCTCTCCACTGTTCGGGTTCCCGCCTCCAGGGCCTCCTTCCATTAGCTTTGGCTTCCCAAAAATGAATGATTCGGCTCCTATTCCTGCCTTCAGCAGTCCTGCAGTGACCTCTCTTTTGGCCCAAGCTCCCCCAGATATTTCCCCTACAAACTTCACATTCGGAGCAGGTCAGACTCAGAACAGTGTGCTTGGGAGCCCATTTAATGCCAATGTGCCTAATCCAACTGGCAGTGATACCCAAATGGATGGTTCTTGA 828 0.4795 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPAASEKNSVRVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNVRQTVPSCQNLYRNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTEGVHQQLQEYEHKIYGSVDTGSSPLFGFPPPGPPSISFGFPKMNDSAPIPAFSSPAVTSLLAQAPPDISPTNFTFGAGQTQNSVLGSPFNANVPNPTGSDTQMDGS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2252 275 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 106 174 IPR000387 GO:0016311|GO:0016791
Sto5g2252 275 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 185 IPR020422 GO:0006470|GO:0008138
Sto5g2252 275 CDD DSP_plant_IBR5-like 47 179 - -
Sto5g2252 275 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 275 - -
Sto5g2252 275 SMART dsp_5 46 182 IPR020422 GO:0006470|GO:0008138
Sto5g2252 275 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 275 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Sto5g2252 275 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 184 IPR029021 -
Sto5g2252 275 MobiDBLite consensus disorder prediction 248 275 - -
Sto5g2252 275 ProSitePatterns Tyrosine specific protein phosphatases active site. 127 137 IPR016130 GO:0016311|GO:0016791
Sto5g2252 275 Gene3D Protein tyrosine phosphatase superfamily 31 186 IPR029021 -
Sto5g2252 275 Pfam Dual specificity phosphatase, catalytic domain 55 181 IPR000340 GO:0008138|GO:0016311
Sto5g2252 275 SMART ptp_7 86 188 IPR003595 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2252 1 169 Protein tyrosine phosphatase (PTP) family AT2G04550 75.581 9.68e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2252 K04459 - gmx:100806021 450.669