Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2248 ATGGCGGCAGGACTCTCCGCCGCCGTAACCTTGAAGCCTCTGCGTCTCTTCCAGACCTCAGTCTCACTCTCGGACCCTCTCCCGAAGGCGGCGCCGACGGCGCTGCTCTTCTTCACTCGCTCGAGAGGTTTCCATCGTGGCCACCGCACAATATTCCACCGAACTCCGAGAATGACGAGGAGCTTCACCGTCTGCGTGCTCATGGAGGACCGGAAACAGAGTATCCACCAGATCGAAGCCGACGCGGACGCGGAGAAGGCCGCCGATGATAAGCCAGTCGATTCCGAAGCCGTATCGGCTCGCATGGCGGAGAGATTGGCCAGGAAGAGATCGGAGAGGTTCACTTATCTCCTTGCGGCTGTGATGTCTAGCTTCGGAATTACGTCCATGGCTGTCATGGCCGTTTATTATAGATTCTGGTGGCAAATGGAGGGTGAAATGCCTTGGTCTGAAATGTTTGGTACACTTTCTCTCTCCATTGGTGCTGCTGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAGAGCTCTATGGCATGATTCCTTGTGGCATATGCATGAGTCGCACCACAGAGCTAGAGAAGGGCCATTCGAGCTAAACGACGTTTTCGCAATAGTAAACGCAGTACCAGCCATCGCACTCCTCTCCTATGGTTTCTTCCACAAGGGTCTGGTCCCTGGCCTGTGTTTTGGTGCTGGTCTTGGAATTACGGTGTTTGGGATAGCCTACATGTTCGTCCACGATGGTTTGGTCCACAGAAGATTCCCAGTAGGACCCATTGCCAATGTGCCCTACttcagaagggtagctgctgcTCACCATCTCCACCATACAGACAAATTCAAGGGGGTTCCATATGGGCTATTTTTGGGACCAAAGGAAATTGAGGAAGTGGGAGGAGCAGAAGAGCTGGAGAAAGAGATAAGTAGGCGAACAAAATCATATAAAGTATCATGA 957 0.5141 MAAGLSAAVTLKPLRLFQTSVSLSDPLPKAAPTALLFFTRSRGFHRGHRTIFHRTPRMTRSFTVCVLMEDRKQSIHQIEADADAEKAADDKPVDSEAVSARMAERLARKRSERFTYLLAAVMSSFGITSMAVMAVYYRFWWQMEGEMPWSEMFGTLSLSIGAAVGMEFWARWAHRALWHDSLWHMHESHHRAREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGIAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHHLHHTDKFKGVPYGLFLGPKEIEEVGGAEELEKEISRRTKSYKVS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2248 318 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 56 316 IPR045019 GO:0016491
Sto5g2248 318 Pfam Fatty acid hydroxylase 162 289 IPR006694 GO:0005506|GO:0008610|GO:0016491
Sto5g2248 318 PANTHER BETA-CAROTENE HYDROXYLASE 56 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2248 Sto-Chr5 17265328 17276278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2248 1 232 Chloroplast and Mitochondria Gene Families AT4G25700 61.111 1.25e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2248 K15746 - gmx:100802778 437.958