Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2194 ATgcaagatattttaaaaagacaGCTTTGTTTGAATGAAGATTTGTTATGTGATGGTGACTACTTCCATATTCGTTGTTCTGCTCATATTTTGAATCTTATTGTTCAAGAAGGATTGAAAGTAGCAAGTGATGCATTGCATAAGATTAGAGAAAGTGTAAAATATGTGAAAGCATCTGATGGGAGGATGCAAAAATTTGATGACTGTGTCCGTGAGAGTGGTGGAGTTGAAACAGGGCTTGGGGTACGATTAGATGTCACAACAAGATGGAACTCCACTTATTTGATGCTCGAAAGTGCACTCCATTATCAAAAGGCTTTCACCCGCCTCAACTTAATTGATAGGCATTATAAATATTGTCCATCAgttgaggaatggagaagagcaAAAAAATGCcgatttaaaaagtttaaaaatcatACTTCATCTAGTGCGGGGAAGTCTGAATTAGATCAATATTTGGATGAGGCAGCACTTGATTCTGATTTTTATGAAGACTTAGAAGTCTTGCAATACTGGAAGGATGTGCAAAAGCGATTCCCACATTTGTCTATTATGGCACGTGATGTACTAAGCATTCCAATAACTACTGTGGCTTCTGAGAGTGCATTTAGTATTGGTGCTCGTGTTTTAACGAAGTATAGAAGTTCTATCCTTCCTGAAAAGTCTTCTTCAAAATTCCATGCACCGAAATCCGATATCACTCACATTCATTCACATTCGGACTCACTCACACTCCCTCACATTGAATCGCTTCTCTTCTTCAAAACCCAATCAATGTCCACCACTAATCGCAGCGTTTCCTGGACTATCGACCCTGACTTCGACGGTATCGACCTTGACCCCTCCGATTTCGGCTCCTCCATCCCCCTCAAGAAGGTCCCAAACGGCGACGTTTTCTCCGCCTCACGCGCCGGCGACGTTGACCGCCTCCGCTACCTCCTCGAATCCGGAGTGAACGTCAATGCGCGAGACCAGTGGGATTCAGTGGCTCTGTACTACGCTTGCCTCGCCGGCCACCTCGATGCTGCGCGCATGTTGCTCGAGAGTGGTGCTATCTGCTCCGAGCATACCTTCGACGGCGACCGCTGCCATTACGCCGCCCTCAATTTGAAGGTCAGGAAGTTGTTGAAGGCGTTCGAGGCAAGACCGCCGCCTTTGGGTCCCTTGCAGGCGGCGTTGAGGGATACCTTTTTGGGATGTGCGGCAAATAGGGCCTACTTGGAGCTTGCTGATCCTCAGTTTCAAATTTCGGGAAGACCTATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATTTTTCAAGAAAAAGTTTGAAGGTGATTGGAAAGAGCGCAGGGAAGTAAGATTCTCCCGAGAAAAGTTATCATATCCTGCTCTCTATAGCCTTCTACACTTCTTTTATTCTGACAGATTAGAGATTGCAGTTGATGACATGGAAGATCTTGTGAGAATCTGTAAAGTGTGCAGATGCGAATCACTACAGAGACTCCTTGAGAAAGAACTAGTTCATCAAAAATATGCAGAGTATAAAGCTCTGAGAGATCTAGACAATTCTCAGAAACGGTTTATTTTACAGGGTTTATCTCTTCCGGAAGAAGACAGGCTTCCTGCAGCCTTGCATCGAATTCTTTTAACTGCCCTTTCAAATTCCAATCAAGGAAATGGCCAGAATGATGGAACTGATATATTGGTATCTGGTGTGAGTGCAATGCAGATTGCTAATTCTGTGGATGATCTTGCTGATGTTTGTGTAAGAGTTGATAGAAAAGTTTTTCGTTGCCATCAAGTTATTTTAGCATCAAGGTATACTGATGGTTTGAAGGATATTGATCCTGATCAgGCAGAGGAAATGTTTGATGCTGCTTCTAGATATTTACTGTTTCCTCTAAAGCGTGCAGTGGCTGAGGCGCTGCTGCCACACTTGGAAATGGCTTCACCTGCTGAACTTTGCCACTGGTTGATACTAGCAGACATGTATGGTGTTTTGAAGATACGGGAATACTGTCTAGACACCATAGCTTGTAATTTTGAAACATTTGCCGATACTAAAGAATTCCGAGCAATGCTATTGACGCTGCCGCCACCATCTGGAGACTCGTCTCTTCGTACCACTGTTCCAAGCGCTCCTGGAGCTGCTGTAAACACCGATCAAGGCAATCTTCTTGATGATTTACGAGAGAAATGGCTCGAAGTTGAAGCTGCCGAGCTTGACGAGAGAGATGAGAGTGCATTGCAGTTTGACAAGCGCCTAGAAATGCTCATGCTTGTTGCAGAGCAAGAAAAATTGGACAATTCTGATTCAGAAGATATGGATAGTGTGGCATGA 2334 0.4302 MQDILKRQLCLNEDLLCDGDYFHIRCSAHILNLIVQEGLKVASDALHKIRESVKYVKASDGRMQKFDDCVRESGGVETGLGVRLDVTTRWNSTYLMLESALHYQKAFTRLNLIDRHYKYCPSVEEWRRAKKCRFKKFKNHTSSSAGKSELDQYLDEAALDSDFYEDLEVLQYWKDVQKRFPHLSIMARDVLSIPITTVASESAFSIGARVLTKYRSSILPEKSSSKFHAPKSDITHIHSHSDSLTLPHIESLLFFKTQSMSTTNRSVSWTIDPDFDGIDLDPSDFGSSIPLKKVPNGDVFSASRAGDVDRLRYLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDTFLGCAANRAYLELADPQFQISGRPIEAHRVILSARSPFFKKKFEGDWKERREVRFSREKLSYPALYSLLHFFYSDRLEIAVDDMEDLVRICKVCRCESLQRLLEKELVHQKYAEYKALRDLDNSQKRFILQGLSLPEEDRLPAALHRILLTALSNSNQGNGQNDGTDILVSGVSAMQIANSVDDLADVCVRVDRKVFRCHQVILASRYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVAEALLPHLEMASPAELCHWLILADMYGVLKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPSAPGAAVNTDQGNLLDDLREKWLEVEAAELDERDESALQFDKRLEMLMLVAEQEKLDNSDSEDMDSVA 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2194 777 Pfam Ankyrin repeats (many copies) 300 348 IPR002110 GO:0005515
Sto5g2194 777 Gene3D Potassium Channel Kv1.1; Chain A 604 686 IPR011333 -
Sto5g2194 777 CDD BTB_POZ_ZBTB_KLHL-like 582 627 - -
Sto5g2194 777 CDD BACK 653 691 - -
Sto5g2194 777 ProSiteProfiles Ankyrin repeat profile. 302 326 IPR002110 GO:0005515
Sto5g2194 777 SUPERFAMILY POZ domain 410 506 IPR011333 -
Sto5g2194 777 Gene3D Potassium Channel Kv1.1; Chain A 394 526 IPR011333 -
Sto5g2194 777 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 605 760 IPR044515 -
Sto5g2194 777 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 269 604 IPR044515 -
Sto5g2194 777 SMART BTB_4 411 508 IPR000210 GO:0005515
Sto5g2194 777 SUPERFAMILY Ribonuclease H-like 16 221 IPR012337 -
Sto5g2194 777 ProSiteProfiles BTB domain profile. 411 478 IPR000210 GO:0005515
Sto5g2194 777 Pfam BTB/POZ domain 409 507 IPR000210 GO:0005515
Sto5g2194 777 Pfam hAT family C-terminal dimerisation region 149 222 IPR008906 GO:0046983
Sto5g2194 777 SUPERFAMILY Ankyrin repeat 301 378 IPR036770 -
Sto5g2194 777 SUPERFAMILY POZ domain 580 643 IPR011333 -
Sto5g2194 777 Gene3D - 299 384 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2194 Sto-Chr5 16729224 16742906 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto5g2194 BTB 9e-16 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2194 K10520 - qsu:111999987 829.706