Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2143 ATGGAACCCAGATTTGGGTACTTCTCCTTCTTGCTCGCTTCAATTTTTCTGTGCGTCGTCGAATCCAAATGCGGCGAGACTTGCGATTTAGCTCTTGCTTCGTACTATATCACGGAAGGTTCCAACCTAACGTACGTTTCGACGATCATGAAATCCCCAATTCTTTCAACGCCCGACGACATCGTCAGCTACAACAAGGACAAAATCCCTAACAAGGACAGCGTGCCGTCGAACATAAGCCTCAACGTCCCCTTCCCGTGTGGCTGCATTGACGATGAGTTTCTGGGTCACAAGTTTGAGTACGATGTTCAGACAGGGGACACCTATGAGCGTATTGCGAAGACGAACTTCGCGAATTTGACTACCGTGGAGTGGTTGCAGAAGTTCAATAGCTACCCGCCGAACAACATTCCGGACACTGGAACCCTAAATGTCACGGTTAATTGTTCCTGTGGGGACAGGGCTGTGTCTGAGGATTATGGGTTGTTCATCACGTACCCGCTTAGGCCTGGGGAGACTTTGCAGTCTGTGGCGAATGAGGTGGATCTTGACTCTGGGTTGCTGCAGAGGTATAATCCCTCTGTGAATTTCAACCAAGGAAGTGGCCTGGTTTATATTCCGGGCAAAGGTATGCAATGGGATTTTGCTGTGATGATTTGGGGCTTATGCTGTCTAGGTGCTGGGGCTATAGCTGGAATATGCGTTGGAGTAGTTGTGGGGCTTCTGTTATTGGCAGTTTGTATCTATGTTGGATATTTtcaaaagaagaagatagaggAGGTGAACTTACTTCCACAAAATTCCAAAGGTCCCTCTTCTCAGCATAGGAGGGCCTCTGGTAATGCTGAAAATCAAACTTCAGGATCTGGTGATCCTGCTGCTGGTAGTGTTGCTGGCATCGCTGGCATTACAGTGGACAAATCAGTCGAGTTTTCATATGAAGAACTAGCCACTGCCACAAATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAACTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAGAGAATTTTTAGCTGAATTGAAAGTCCTAACACGTGTTCATCACCTTAATTTGGTGCGGTTGATCGGATATTGTGTTGAGGGTTCCCTTTTCCTTGTATATGAGTTCATTGAGAATGGAAACTTAAGTCAGCATCTCCATAGCTCAGGAAGAGACCCACTGCCATGGACTACCAGGGTGCAAATTGCTCTGGATTCCGCCCGAGGTCTTGAATATATTCACGAGCATACAATGCCAGTATATATACATCGTGACATAAAGTCAGCAAACATATTAATAGACAAAAACTTCCGCGGAAAGGTTGCAGATTTTGGATTGACCAAACTGACTGAAGTTGGCAGCTCATCACTTCCCACTGGTCGTCTTGTGGGAACATTTGGTTACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTCTATGCTTTTGGAGTAGTCCTTTATGAACTTATTTCTGCTAAGGAAGCTATCATCAAGACTAGTGAATCTATTGCCGACTCGAAGGGCCTCGTAGCTTTGTTTGAAGGAGTTCTTAGTCAGCCTGATCCTACTGAGGATCTTTGCAAACTGGTGGACCCAAGGCTTGGAAATGACTACCCTATTGATTCAGTTCGCAAGATGGCTCACCTAGCCAAAGCATGCACACAGGACAATCCCCAACTACGACCAAGTATGAGGTCTATTGTTGTTGCTCTTATGACACTTTCATCGGCTACTGAGGATTGGGATGTTGGTTCCTTCTATGAAAATCAAGCTCTTCTGAATCTTATGTCTGGAAgataa 1869 0.4478 MEPRFGYFSFLLASIFLCVVESKCGETCDLALASYYITEGSNLTYVSTIMKSPILSTPDDIVSYNKDKIPNKDSVPSNISLNVPFPCGCIDDEFLGHKFEYDVQTGDTYERIAKTNFANLTTVEWLQKFNSYPPNNIPDTGTLNVTVNCSCGDRAVSEDYGLFITYPLRPGETLQSVANEVDLDSGLLQRYNPSVNFNQGSGLVYIPGKGMQWDFAVMIWGLCCLGAGAIAGICVGVVVGLLLLAVCIYVGYFQKKKIEEVNLLPQNSKGPSSQHRRASGNAENQTSGSGDPAAGSVAGIAGITVDKSVEFSYEELATATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLHSSGRDPLPWTTRVQIALDSARGLEYIHEHTMPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIIKTSESIADSKGLVALFEGVLSQPDPTEDLCKLVDPRLGNDYPIDSVRKMAHLAKACTQDNPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALLNLMSGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2143 622 SUPERFAMILY Protein kinase-like (PK-like) 306 594 IPR011009 -
Sto5g2143 622 ProSiteProfiles Protein kinase domain profile. 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g2143 622 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Sto5g2143 622 MobiDBLite consensus disorder prediction 265 292 - -
Sto5g2143 622 Pfam LysM domain 101 141 IPR018392 -
Sto5g2143 622 SMART serkin_6 323 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g2143 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 622 IPR044812 GO:0019199|GO:0045087
Sto5g2143 622 MobiDBLite consensus disorder prediction 265 293 - -
Sto5g2143 622 Pfam Protein tyrosine and serine/threonine kinase 325 593 IPR001245 GO:0004672|GO:0006468
Sto5g2143 622 Gene3D Phosphorylase Kinase; domain 1 308 393 - -
Sto5g2143 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Sto5g2143 622 Gene3D Transferase(Phosphotransferase) domain 1 394 612 - -
Sto5g2143 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 12 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2143 Sto-Chr5 16267742 16279503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2143 11 622 Receptor kinase-like Gene Family AT3G21630 59.319 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto5g2143 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2143 - K13429 gmx:100777781 888.256