Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2133 ATGGGAAGCCATGGAGCGATTTtacagagaaagaagaagaagaatatagaAGGCGGCTGGAAGGTCGTGGCTAGGTTTAGCCGAAAAAATGCTGTGAAGCTtgtaggctctgataccataaagtGTAGGCAGAAACTGATGCAAAAAAGCCGTGTGTATTGTATTGATGTGAATCGTATAAGTAGGACTTTATTTGATTATACTCAACAACTGAACCATAATAATTTGTCTATGGTTTATTTTGACTCTTCTTGGTATAAGGCACCAGAGCTCGTGTATTATAAACCTGCTATGGATGTATGGTCTGTTGGTATTATCTTCACTGAGATGGTAACCAGGAGGCCTATAAGTACTCAGGATGTCATTATGAATTGTAAGAAGCTTGATGCACTGTGTCCTGGCCTTGAACAAGATGGCCTAGATCTTCTATCGGCCATGTTTTGTGATTATCCAGATTCAAGGATTTCAGTTGCAAATGCCCTTTCCCATCACTATTTCAATTATTTGAATCTGGTATGTACTTGTTCTACTTCTGCTCCTAATCTTGGCTATGTATTTTTGAAACTCCTCCACCCTCCTGATGTCGTCAGACAAGAAGGTGCACCATCAATGCAAAAGCTTCAAGGCGAAGTTGAACCATAG 642 0.3754 MGSHGAILQRKKKKNIEGGWKVVARFSRKNAVKLVGSDTIKCRQKLMQKSRVYCIDVNRISRTLFDYTQQLNHNNLSMVYFDSSWYKAPELVYYKPAMDVWSVGIIFTEMVTRRPISTQDVIMNCKKLDALCPGLEQDGLDLLSAMFCDYPDSRISVANALSHHYFNYLNLVCTCSTSAPNLGYVFLKLLHPPDVVRQEGAPSMQKLQGEVEP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2133 213 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g2133 213 Gene3D Transferase(Phosphotransferase) domain 1 78 116 - -
Sto5g2133 213 Gene3D Transferase(Phosphotransferase) domain 1 124 168 - -
Sto5g2133 213 Pfam Protein kinase domain 65 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g2133 213 SMART serkin_6 10 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g2133 213 PANTHER CELL DIVISION CONTROL PROTEIN 2 HOMOLOG A-LIKE 84 168 - -
Sto5g2133 213 PANTHER CELL DIVISION PROTEIN KINASE 84 168 - -
Sto5g2133 213 SUPERFAMILY Protein kinase-like (PK-like) 72 169 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2133 Sto-Chr5 16173285 16175131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2133 83 209 Core Cell Cycle Gene Families AT1G73690 32.317 4.69e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sto5g2133 Pkinase 3.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2133 - - csin:114286482 71.2478