Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2127 ATGGGAGAGAAAGAATGGTACTTTTTCTGTGTTAGAGACAAAAAATACCCAACTAGTTTGAGAACGAACAGAGCCACTAAAGCAGGGTACTGGAAAGCCACAGGGAAAGACAGAGGGATTTACAGAGGAAAATCTCTGGTAGGGATGAAGAAGACTCTGGTTTTCTACAGAGGAAGAGCCCCAAAAGGCGAAAAAACGAACTGGGCCATGCGTGAATATGGGTTAGAGGGTAAATTCTCCATACACAACCTCCCAAAAACCGCAAAGGGTGTTTTAGAAGAATTCAGGAAGGAAGAAAACCCATATTTCTGGGATAATGAGGTTGGAATCCATAGGGAACGAATTGTGTTCTTCTGGTTTACCTCCGCTCACAGGAAGGAAGAAAATCCATAA 393 0.43 MGEKEWYFFCVRDKKYPTSLRTNRATKAGYWKATGKDRGIYRGKSLVGMKKTLVFYRGRAPKGEKTNWAMREYGLEGKFSIHNLPKTAKGVLEEFRKEENPYFWDNEVGIHRERIVFFWFTSAHRKEENP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2127 130 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 1 90 - -
Sto5g2127 130 Gene3D NAC domain 1 104 IPR036093 GO:0003677|GO:0006355
Sto5g2127 130 SUPERFAMILY NAC domain 2 92 IPR036093 GO:0003677|GO:0006355
Sto5g2127 130 ProSiteProfiles NAC domain profile. 1 98 IPR003441 GO:0003677|GO:0006355
Sto5g2127 130 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 90 - -
Sto5g2127 130 Pfam No apical meristem (NAM) protein 2 75 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2127 Sto-Chr5 16111521 16112024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2127 1 89 NAC Transcription Factor Family AT5G61430 88.764 1.13e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto5g2127 NAM 5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2127 - - jre:108982391 176.022