LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g2116	ATGGAGTTTCTTCGGACTCACAAGGTTGAGAAGATAAGCATAGCTGTTGCTGTTGTGGCCATTGTCGGTGGCACCGCTTACTATTTCTGCGTCACCAAGAAGTCTAAAGGCGCCAGTTGTTTGGACCCGGAGAACTTCAAGCCATTTAAACTTGTCAAACGCACACAAATCAGCCATAATGTGGCTAAGTTTAGATTTAGTCTTCCAACTCCTGACTCAGTGTTGGGACTTCCTATTGGACAACATATTAGTTGCAGAGGGAAAGATAGTCTTGGTGAGGAAGTAATCAAACCATATACTCCAACAACGTTGGATACTGATCTTGGATACTTTGAATTAGTTATAAAGATGTATCCAGAAGGAAGGATGTCTCACCATTTCAAAGAGTTGCAAGAAGGTTATTACTTGGCCGTGAAGGGACCAAAGGGACGCTTCAAGTACCAACCCAACGAAGTTAGAGCTTTTGGGATGATTGCTGGTGGCACTGGCATCACCCCAATGTTTCAGgttaCAAGAGCTATACTGGAAAACCCGCAAGACAAAACTAACATTCATCTGATATATGCCAATGTCACATATGATGACATTCTATTAAAGGAAGAGCTGGACAATTTTGCCCAAAAGTTCCCAAGTCGTTTCAGAGTCTATTATGTTCTAAATCAGCCACCAGAAGAATGGGATGGTGGTGTTGGATTTGTATCTAAGGAAATGATCCAAACACATTGCCCTGCACCGTCTCCTGATATTAAGATATTAAGGTGCGGACCGCCTCCCATGAACAAGGCCATGGCTGCTCATCTTGATGCTCTTGGATACAGTTCCCAAATGCTGTTTCAATTTTAG	843	0.427	MEFLRTHKVEKISIAVAVVAIVGGTAYYFCVTKKSKGASCLDPENFKPFKLVKRTQISHNVAKFRFSLPTPDSVLGLPIGQHISCRGKDSLGEEVIKPYTPTTLDTDLGYFELVIKMYPEGRMSHHFKELQEGYYLAVKGPKGRFKYQPNEVRAFGMIAGGTGITPMFQVTRAILENPQDKTNIHLIYANVTYDDILLKEELDNFAQKFPSRFRVYYVLNQPPEEWDGGVGFVSKEMIQTHCPAPSPDIKILRCGPPPMNKAMAAHLDALGYSSQMLFQF	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g2116	280	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	156	175	IPR001709	GO:0016491
	Sto5g2116	280	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	194	205	IPR001709	GO:0016491
	Sto5g2116	280	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	250	258	IPR001709	GO:0016491
	Sto5g2116	280	SUPERFAMILY	Riboflavin synthase domain-like	40	150	IPR017938	-
	Sto5g2116	280	Gene3D	Translation factors	36	138	-	-
	Sto5g2116	280	Pfam	Oxidoreductase NAD-binding domain	157	263	IPR001433	GO:0016491
	Sto5g2116	280	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	280	IPR001834	GO:0016491
	Sto5g2116	280	Gene3D	-	139	280	IPR039261	-
	Sto5g2116	280	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	136	275	IPR039261	-
	Sto5g2116	280	CDD	cyt_b5_reduct_like	49	280	-	-
	Sto5g2116	280	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	280	-	-
	Sto5g2116	280	Pfam	Oxidoreductase FAD-binding domain	49	147	IPR008333	-
	Sto5g2116	280	PRINTS	Cytochrome B5 reductase signature	75	86	-	-
	Sto5g2116	280	PRINTS	Cytochrome B5 reductase signature	97	104	-	-
	Sto5g2116	280	PRINTS	Cytochrome B5 reductase signature	133	147	-	-
	Sto5g2116	280	PRINTS	Cytochrome B5 reductase signature	156	175	-	-
	Sto5g2116	280	PRINTS	Cytochrome B5 reductase signature	194	205	-	-
	Sto5g2116	280	PRINTS	Cytochrome B5 reductase signature	250	258	-	-
	Sto5g2116	280	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	44	148	IPR017927	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g2116	Sto-Chr5	15998308	16006636	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g2116	2	280	NADPH P450 reductases	AT5G17770	72.401	2.94e-150	419

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g2116	K00326		-	gmx:100812559	469.544