Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2106 ATGGATGTTCAAGTAATAAACGTGGAAGAAGGGTCTGGCCGTCAAGCTATGACAGATGATGGGGATGCTGAACCTAGTGAAGGTGAAGTTAATAATGTGGAAAACTCCGGATCTCATGTTGATGATGGAATTTTTGAGCCATATGTGGGAATGGAGTTTGATTCTGAAGATGCTGCGAAGACTTTCTACTGTGAGTATGCCAAACGTGTGGGTTTCGGCACCAAAGTTGGCCAGCATGGCCGTTCTAAAGTTGATGGGGCAATCAGTTATCGGGAGTATGTTTGTGGAAGGGATGGTTCAAAAAGAAGGTTAACCGACAGTTGTGATGCAATGATTAGAGTGGAGTTAAAGGGTCAAAATAAATGGGTTGTAACAAAATTTGTGAAGGATCATAGTCATTCGATGGTGAGTTCCAGTAAGGTGCATCACCTTCGGCCACGTAAACATTTTTCTAGTGTTGGAAAGACCGTGCCTGAAACTTACCAGGGAGTAGGACTGGTTCCAAGTGGTGTCATGTATGTATCCATGGATGGGAATCGTGTTTCTAATGAGAACCGTGGAGTTCGGAACACTCCTCCTCATGAATCAATTCACTCAGTTAGGAATTCTACAACAATGAATTATACTGTTAGGCCTCCTATACGGAAGAGGACATTAGGAAGAGATGCTCAGAATCTACTGGAGTATTTTAAGAAAATGCAGGCTGAGAATCCTGGTTTCTTCTATGCAATACAACTTGATGAAGAGAATCATATGTCTAATGTATTTTGGGCAGATGCAAGATCAAGGACAGCTTACAATCATTTTGGTGATGCAGTGACACTAGATACAACATACAGAGTAAATCAATACAGAGTTCCTTTTGTTCCATTCACTGGGGTGAACCATCATGGTCAGATGATTTTGTTCGGTTGTGCACTTCTTTTGGATGATTCCGAGGCTTCCTTTGTGTGGCTCTTTAAGACTTTTCTGACAGCAATGAATGATCATCACCCTGTCTCTATAATTACTGATCAAGATAGAGCCATACAGACTGCAGTTTCTCAAGTCTTTCCTCAAACCCGCCACTGTATAAGCAAGTGGCATGTCTTGCGAGAAGGCCAAGAAAGGTTGGCCCATGTTTGTCACACACATCCTAACTTTCAGGTTGAactttataattgtatcaacCTAACTGAGACCATTGAAGAGTTTGAGTCATCTTGGACTTCTATCCTTGATAAATATGAACTCCGAAGGAACGACTGGCTTCAGTCATTGTATAATGCTCGTGCTCAGTGGGTCCCAGCATATTTCCGTGATTCATTTTTCGCTGCAATATCTCCTAATAGAGGATTTGATGGATCATTTTTTGATGGTTACGTCAACCAACAAACGACAATACCAATGTTCTTTAGGCAGTATGAAAGAGCCCTTGAGAACTGGTTTGAAAAGGAAATAGAAGCAGATTTTGAAACTATTTGCACTACACCAGTTTTAAGGACACCTTCACCTATGGAGAAACAGGCTGCTAGTCTttatacaagaaaaatattttctttgtttcAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGACGTAAATAGTACATTCAGAGTTGCAAAATTTGAGGATGATCAGAAGGCATATGTTGTCACATTAAACCATCCAGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCCGGCATTCTTTGCAGGCATGTTTTAACTGTCTTCACTGTCACAAATGTACTTACATTACCACCTCATTACATCTTAAAGCGTTGGACAAGAAATGCAAAAAGTGGCGTTGGATCAGATGAACGTGTTGGTGAATTACATGGTCAGGAGTCTCTAACGTCAAGGTATAGTAGTCTATGTAGGGAAGCAATCAAATATGCAGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCAGTAAGTGCCCTTAAAGAAGGTGGGAAGAAGATTGCTGCTGTGAAGAAAAATGTTGCCAAAGTTGCACCTCCTAGTAATCAGGCTGGTGGGACTACTTATGATGACAGAAAAACCCCTACATCAACTTCAGATGCAACCCCTCTATTATGGCCACGGCATGATGAAATAATGAGGAGGTTTAATCTTAATGATGCTGGTGCCCCTGTACAGTCAGTTGCTGATCTGAATTTGCCACGCATGGCCCCTGTTTCCCTTCAGCGAGATGATGGTCCACCTGAAAACATGGTGGTTCTCCCTTGTCTGAAATCAATGACTTGGGTGATGGAGAACAAAAACTCAACTCCAGGGAATAGAGTGGCTGTCATTAATTTGAAGTTGCATGATTATAGCAGGACTCCATCAGCAGAATCTGAGGTTAAGTTTCAGCTCTCAAAAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCCTACATCAGTGAACAGCTTTCAACACCAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACCGAGACAACTACTGGGGAGTCCGAAGTAAAGTTTCAGGTGTCCAGGGACACATTGGGTGCTATGTTGCGATCGATGGCCTATATTCGTGAGCAACTTTCTCATGCTATCATTGGGAAGTGCTTGGAGATCAAACCTCCAAAGCTGGTCATAGACCATAGAGCTAAACTCCATGGAATACTTGCCAATGAGGATGAAGCAATCTGTGTATTGGATGCATTGCACTCAGTTGCCTGTGTGTGGCAATCACAAATGGCTCCACAGCACAATGACTTCTTAGCCTACAAATAG 2778 0.4136 MDVQVINVEEGSGRQAMTDDGDAEPSEGEVNNVENSGSHVDDGIFEPYVGMEFDSEDAAKTFYCEYAKRVGFGTKVGQHGRSKVDGAISYREYVCGRDGSKRRLTDSCDAMIRVELKGQNKWVVTKFVKDHSHSMVSSSKVHHLRPRKHFSSVGKTVPETYQGVGLVPSGVMYVSMDGNRVSNENRGVRNTPPHESIHSVRNSTTMNYTVRPPIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENHMSNVFWADARSRTAYNHFGDAVTLDTTYRVNQYRVPFVPFTGVNHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDHHPVSIITDQDRAIQTAVSQVFPQTRHCISKWHVLREGQERLAHVCHTHPNFQVELYNCINLTETIEEFESSWTSILDKYELRRNDWLQSLYNARAQWVPAYFRDSFFAAISPNRGFDGSFFDGYVNQQTTIPMFFRQYERALENWFEKEIEADFETICTTPVLRTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDDVNSTFRVAKFEDDQKAYVVTLNHPELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILKRWTRNAKSGVGSDERVGELHGQESLTSRYSSLCREAIKYAEEGAVAVETYNAAVSALKEGGKKIAAVKKNVAKVAPPSNQAGGTTYDDRKTPTSTSDATPLLWPRHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPPENMVVLPCLKSMTWVMENKNSTPGNRVAVINLKLHDYSRTPSAESEVKFQLSKVSLEPMLRSMAYISEQLSTPANKVAVINLKLQDTETTTGESEVKFQVSRDTLGAMLRSMAYIREQLSHAIIGKCLEIKPPKLVIDHRAKLHGILANEDEAICVLDALHSVACVWQSQMAPQHNDFLAYK 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2106 925 Pfam MULE transposase domain 273 364 IPR018289 -
Sto5g2106 925 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 804 IPR031052 GO:0006355
Sto5g2106 925 Pfam SWIM zinc finger 551 585 IPR007527 GO:0008270
Sto5g2106 925 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Sto5g2106 925 MobiDBLite consensus disorder prediction 673 698 - -
Sto5g2106 925 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Sto5g2106 925 MobiDBLite consensus disorder prediction 675 698 - -
Sto5g2106 925 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 38 804 - -
Sto5g2106 925 MobiDBLite consensus disorder prediction 9 37 - -
Sto5g2106 925 SMART 26again6 562 589 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2106 Sto-Chr5 15902185 15912503 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto5g2106 MULE 6.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2106 - - qsu:112033076 1448.72