Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2093 ATGAATTTCCTTTTGACTTCTGATAAAGAAAAGGCTCAGCAGAATGGAAGTATCCATTGCTGCAACTATTGCGAAAGGGTGTTCGGTAGTCGTCAGGCACTTGGAAGCCATTTAAGGGTACATAAAAACCTTATTTGGAAAACTCCAAATTATCTTGGTCGCAACAATTCCATTGATGGGAACCATCATGAGAATGATAATAAATTCGTCATGTCTTCAAATCTTTCATATGGCACCAACCGTAATGCGTCCTCAAGAGCATTTCCCCTAGGTCGTCCTATATATATGGGGTACCCTAATAATCCTTTGGGTCTTCAGCCCTATCAAGGCTCAACTGGATTTCACCATTTCGATGATGAAGCCGTGCGATCTTTCATACGTCAGTTTCCATCTCTCTCTCGAAATTTGCTTCTTAAGAAGTATCACAACCAAGATTGCCATTCATATGCTCCAGGTGTCTTATGTTCTGCGTATCGCTATAGCATGAATAATTTTTCTGGGTTTAAGGATTTCAATCCTCATCCAGGGCTTGAAGTAAGTAAACTTGTTGACATGAAGAGGTCTGGTTTTGCAAACCTCTTAACTCCACAAGAAGCTAAGTTTGATGGGTCATCATTCTATCGCGATGATAACATTAAGGGCAAAGCTGGTGCAAGTGTGAGGAAACGTTTCTTCTATGAAGCTGCAGCAAATGCTATCGAGGCTCATGCTCCGAAAAGGCCAAGGTTGAGATCTTCCTCACATGTTAGTTGGGAAAGAAATCTACCTACCATTGAGTTGCATCTCTTTAAGGATAAAAATAACTCTGTTGCCATAactaatggaaaagaaaaagtagatGAAGCAAATATGGATCTCTCACTGCACCTGTAG 873 0.3986 MNFLLTSDKEKAQQNGSIHCCNYCERVFGSRQALGSHLRVHKNLIWKTPNYLGRNNSIDGNHHENDNKFVMSSNLSYGTNRNASSRAFPLGRPIYMGYPNNPLGLQPYQGSTGFHHFDDEAVRSFIRQFPSLSRNLLLKKYHNQDCHSYAPGVLCSAYRYSMNNFSGFKDFNPHPGLEVSKLVDMKRSGFANLLTPQEAKFDGSSFYRDDNIKGKAGASVRKRFFYEAAANAIEAHAPKRPRLRSSSHVSWERNLPTIELHLFKDKNNSVAITNGKEKVDEANMDLSLHL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2093 290 SUPERFAMILY beta-beta-alpha zinc fingers 17 43 IPR036236 -
Sto5g2093 290 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 41 IPR013087 -
Sto5g2093 290 Pfam C2H2-type zinc finger 19 42 - -
Sto5g2093 290 ProSitePatterns Zinc finger C2H2 type domain signature. 20 41 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2093 Sto-Chr5 15779540 15780569 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto5g2093 zf-C2H2_6 1.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2093 - K09228 qsu:112012075 83.9593