Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2092 ATGATGAATTTCCTTTTGACTTCTGATAAAGAAAAGGCTCAGCAAAATGGAAGTATCCATTGCTGCAACTATTGCGAAAGGGTGTTCGGCAGTCGTCAGGCACTTGGAAGCCATTTAAGGGTACATAAAAACCTTATTTGGAAAACTCCAAATTATCTTGGTCGCAACAATTCCATTGATGGGAACCATCATGAGAATGATGATAAGTTCGTCATGTCTTCAAATCTTTCATATGGCACCAACCGTAATGCGTCCTCAAGAGCATTTCTGAGTCGTCCTATATATATGGGCATGAATAATTTTTCTGGGTTTAAGGATTTCAATCCTCATCCAGGGCTTGAAGTAAGTAAACTTGTTGACATGAAGAGGTCTGGTTTTGCAAACCTCTTAACTCCACAAGAAGCTAAGTTTGGTGGGTCATCATTCTATCGCGATGATAACATTAAGGGCAAAGCTGGTGGTGCAAGCATGAGGAAACATTTCTTCTGTGAAGCTGCAGCAAATGCTATCGAGGCTCATGCTCCGAAAAGGCCAAGGTTGAGATCTTCGTCACATGTTGGTTGGGAAAGAAATCTACCTACCATTGAGTTGCATCTCtttaaggataaaaataattcTGTTGCAGTAactaatggaaaagaaaaagtagatGAAGCAAATATGGATCTCTCACTTCACCTCTAG 684 0.3874 MMNFLLTSDKEKAQQNGSIHCCNYCERVFGSRQALGSHLRVHKNLIWKTPNYLGRNNSIDGNHHENDDKFVMSSNLSYGTNRNASSRAFLSRPIYMGMNNFSGFKDFNPHPGLEVSKLVDMKRSGFANLLTPQEAKFGGSSFYRDDNIKGKAGGASMRKHFFCEAAANAIEAHAPKRPRLRSSSHVGWERNLPTIELHLFKDKNNSVAVTNGKEKVDEANMDLSLHL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2092 227 Pfam C2H2-type zinc finger 20 43 - -
Sto5g2092 227 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Sto5g2092 227 SUPERFAMILY beta-beta-alpha zinc fingers 18 44 IPR036236 -
Sto5g2092 227 ProSitePatterns Zinc finger C2H2 type domain signature. 21 42 IPR013087 -
Sto5g2092 227 Gene3D Classic Zinc Finger 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2092 Sto-Chr5 15773302 15774334 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto5g2092 zf-C2H2_6 1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2092 - K09228 ghi:107889035 65.855