Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2063 ATGGGGATTCAGACAATGGGTTCTCAAGGTAACGGGCAGCAGTCTCATTTACAGCCTTCTTCTTTAACAAGGCAAAACTCATGGTATAGTCTTACCCTTGATGAGGTTAAAAATCAACTAGGAGACCTGGGGAAGCCATTGGGAAGTATGAATCTTGATGAGCTTCTTCAAAATGTATGGACTGCTGAAGCAAGTAAGTCTATAGGGGTAGAAAATGAGAGCATGTCGTCATCATCTTCTCTTCAACGTCAGGCCAGTCTGACCTTGGCTCGGGCTTTAAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATCCAACAAGGTCAGAAGAAACGGTATTCAGAGGATATAAGAGGTCCAGATAGTGAGATGACTCTTGGTGAAACAACCTTGGAGGACTTCCTGGTACAAGCAGGACTTTTTGCTGAAGCATCTATAAGTCCATCTGTGGCGTTGGATACTGTGGAAGCCACCACCCCTCAATGTCTTCAGCTCAAGACAGGCTTGTCATCATCCCCTTCATTTGGTAGTTTATCTGACTCAAGACCTGGCCGGAAAAGGGATACTCCAGATGCATACGAGAAAGCTTTGGAGAGGAGGCTGAGGAGAAAAATCAAGAACAGGGAATCTGCTGCCCGCTCACGAGCCAGAAAACAGGCATACCATAATGAACTGGTTGGCAAGGTTTCTCATCTAGAAGAAGAAAATTCAAGGCTCAAGAAAGAGAAGGTACAAAATCTCATGAATCGTGACTTTGCTCTTTATGActtgttttataaaaattatgatgagTAA 795 0.4302 MGIQTMGSQGNGQQSHLQPSSLTRQNSWYSLTLDEVKNQLGDLGKPLGSMNLDELLQNVWTAEASKSIGVENESMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYSEDIRGPDSEMTLGETTLEDFLVQAGLFAEASISPSVALDTVEATTPQCLQLKTGLSSSPSFGSLSDSRPGRKRDTPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVGKVSHLEEENSRLKKEKVQNLMNRDFALYDLFYKNYDE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2063 264 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 242 IPR004827 GO:0003700|GO:0006355
Sto5g2063 264 SUPERFAMILY Leucine zipper domain 199 243 IPR046347 GO:0003700|GO:0006355
Sto5g2063 264 Pfam bZIP transcription factor 199 242 IPR004827 GO:0003700|GO:0006355
Sto5g2063 264 Coils Coil 222 242 - -
Sto5g2063 264 SMART brlzneu 195 261 IPR004827 GO:0003700|GO:0006355
Sto5g2063 264 MobiDBLite consensus disorder prediction 1 21 - -
Sto5g2063 264 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Sto5g2063 264 MobiDBLite consensus disorder prediction 166 191 - -
Sto5g2063 264 Gene3D - 197 251 - -
Sto5g2063 264 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 36 249 IPR043452 GO:0003700|GO:0045893
Sto5g2063 264 CDD bZIP_plant_BZIP46 199 248 - -
Sto5g2063 264 PANTHER BZIP TRANSCRIPTION FACTOR 36 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2063 Sto-Chr5 15523914 15526575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2063 21 243 bZIP Transcription Factor Family AT3G56850 45.385 3.43e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g2063 bZIP_1 2.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2063 K14432 - gmx:100798549 391.349