Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g2053 ATGGCAAACCAAGGCCTTGGAATCTCTCACTCCCCAATCTCTCGTACATCTGATGATGAATCCCATGATAATACCTCTCGGGGCTTGGCTACACAACCTGGTAGAACTAGCTTGGCTTTAGGTGGTGGCACTATGTCATTAACCAAAAACGAGCCCTCAAAGTCGTCAACTCCCCCAGGCTATAGCATCCTAGGTGGCAGTAGTGGCGGAAATGATATTGGCAATGACCATATCAACCACAACCTGAATTTTCCACCACCAAAGAAACATAGAGGTAGGCCACGCGGTTCGAAGAACAAGCCCAAACCACCCATTACGATCATTAGAGAGGTTGATGACAAAGCTTTAAAGCCCGTTATCATTGAAATTTCTGCTGGATCTGATGTGGTGGAGGAGCTAATTTATTTTGCCCAACGCCATGAAATGGGGCTCACTGTTCTTAGTGGGTCTGGATCTGTCACTAATGTAACCCTTCACCAACCATTTCCCCATACATCTCCATTAACCCTCCATGGAACCTttactcttctttctctttctggcACTTATATATTAAGAAATCAAGGCCAAGTCTTTGGTGGAGTCATTGCAGGGAGGATTATAGCAACAAGTTCAGTGGTTGTGGTCGCAACATTATGTAAGAACCTTGTGCATCACAAGCTGCCACACAATAATGGAAGTGATGATGTTGTTGCTGCAGATGTCTTCAATGCTAGAAGTTTTAAGAATAATGCCAATGAAATCGGGGGTGGCATGAACACTAGCAATGCTATTATGGCTACGTCTGCTGCTGCTCTTAACGCTGCTAGTGCAAGCCCACTGAATTTCCATGTCCCTTCTGATGCAAATGTCAATGTGATGCAATGGGGCTTCCCTAATCATTCTCATAATTACTAG 897 0.4359 MANQGLGISHSPISRTSDDESHDNTSRGLATQPGRTSLALGGGTMSLTKNEPSKSSTPPGYSILGGSSGGNDIGNDHINHNLNFPPPKKHRGRPRGSKNKPKPPITIIREVDDKALKPVIIEISAGSDVVEELIYFAQRHEMGLTVLSGSGSVTNVTLHQPFPHTSPLTLHGTFTLLSLSGTYILRNQGQVFGGVIAGRIIATSSVVVVATLCKNLVHHKLPHNNGSDDVVAADVFNARSFKNNANEIGGGMNTSNAIMATSAAALNAASASPLNFHVPSDANVNVMQWGFPNHSHNY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g2053 298 MobiDBLite consensus disorder prediction 1 105 - -
Sto5g2053 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 225 - -
Sto5g2053 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 56 293 - -
Sto5g2053 298 CDD DUF296 117 212 IPR005175 -
Sto5g2053 298 Gene3D - 116 233 - -
Sto5g2053 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 56 293 IPR014476 GO:0003680
Sto5g2053 298 MobiDBLite consensus disorder prediction 84 98 - -
Sto5g2053 298 MobiDBLite consensus disorder prediction 26 78 - -
Sto5g2053 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 212 IPR005175 -
Sto5g2053 298 ProSiteProfiles PPC domain profile profile. 113 239 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g2053 Sto-Chr5 15451107 15452072 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g2053 88 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 42.675 4.81e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g2053 - - zju:107410711 167.548