Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1977 ATGATTTGCTCCCTCAAACAACAACCTGGTATAGCTCTCAGTACTTCCGATGTTGTTCTTCGTCGGAGAAGCCACTCGAATCCTCCTCTTCTTCCCCTTCAGTCAAGCTTGCTTTTACCGAAGAAGGAGGAGAAAGAAGCTAAGCGGCGATCTCTGATTTCAGTACACAAACCCTTGCACCTCTGTTCGACGGCTAAGAATTTCTcgccgtcgtcgtcgtcgtcggtGGGGGATGATGATCTCGTGTCCGCCGTGAGGCCTCGTCGGAGTTCGATCATCCGATGCGAAGCCTACGAGGCGGACCGATCGGAGGTCGAGGCGACGCCGTCGGAGGCGGCGAAGAAGGTGAAAATTGGGATATATTTTGCGACGTGGTGGGCTCTGAACGTTGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCGTATCCTTACCCTTGGCTTACTTCCACGCTCTCGCTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACGAGGATAGTGGAGGCTCCTAAGACCGATTTTGAGTTTTGGAAGACTCTGTTTCCGGTTGCTGTGGCTCATACAATTGGACATGTGGCTGCAACTGTTAGTATGTCAAAGGTTGCAGTTTCGTTCACTCATATCATCAAGAGTGGTGAGCCTGCTTTCAGTGTACTGGTTTCAAGATTTCTTCTGGGCGAGACCTTCCCGGTGCCGGTCTATCTTTCCTTACTTCCAATCATCGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAACTTCAACATGATTGGTTTTATGGGAGCCATGATATCCAATTTGGCTTTTGTATTTCGGAACATATTTTCAAAACGGGGCATGAAGGGAAAGTCTGTTAGCGGGATGAACTACTATGCTTGTTTGTCTATATTGTCTCTCGCAATTCTCACACCATTTGCAATTGCTGTTGAGGGACCACAGATGTGGGCAGCTGGTTGGCAAACAGCTCTCTCTCAAATTGGACCACAATTTATATGGTGGGTGGCCGCTCAGAGCGTGTTCTATCATCTCTATAACCAGGTATCATACATGTCCTTAGATGAGATCTCTCCCTTGACGTTTAGCATTGGAAACACAATGAAACGTATATCGGTCATAGTCTCCTCAATTATCATCTTCCACACACCTGTTCAGCCCATCAACGCTCTTGGAGCTGCTATCGCAATCCTTGGAACCTTCTTGTATTCACAGGTGGAATTTCAAGTTGTAGAACGTGTTGAGCCAATTGACATTGTTTGA 1266 0.4605 MICSLKQQPGIALSTSDVVLRRRSHSNPPLLPLQSSLLLPKKEEKEAKRRSLISVHKPLHLCSTAKNFSPSSSSSVGDDDLVSAVRPRRSSIIRCEAYEADRSEVEATPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIVEAPKTDFEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQVEFQVVERVEPIDIV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1977 421 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 117 410 IPR004696 GO:0016021|GO:0022857|GO:0055085
Sto5g1977 421 PANTHER SOLUTE CARRIER FAMILY 35 78 407 - -
Sto5g1977 421 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 78 407 - -
Sto5g1977 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 159 252 - -
Sto5g1977 421 Pfam Triose-phosphate Transporter family 117 405 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1977 Sto-Chr5 14812404 14815682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1977 1 409 Antiporters AT5G54800 73.445 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1977 K15283 - gmx:732659 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1851 9 22918906 22921413 Sto5g1977 5 14812404 14815682 ECH
Sto5g1977 5 14812404 14815682 Sto5g1977 5 14812404 14815682 ECH