Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1916 ATGAAGAAGATTTGGGGTCGTCGTCATCATCGCTGGGTCGTGTTTTGCATTGCTTCCCTCTGTGTTTCTTCTCTCTTGTTCACAAGGGTTTCTTCAACCTCATCGCCTACTCTAAACACTGATCATGGCGAAACAGATTCTACTGTGGGAAgAAGTTCGAGGCAGGAGCAGAGTGGCAATCATGAAATACATTGCTCTAGAGAAAGAAGTAGAGCAGCATGGAAGATCATTGAGGAGTATTTGATGCCTTTCGTGGAGAAAGAACGATATCAACTCTCAAAAAAGTGTAGGCTTAACCCTGACAATGATCTCTATAGGGATCAGGAACAACATAAGTCTCATAGAGATATAAATGAATGGCAATGCGGGTACTGCAAAAAAGTTTTCTACGAGGAGAAACATCTTGATCTGCATTTTGACAACAGGCATTCCAATTTATTGGATCCAAGTCAAAGAAAGTGTTTGGCAGATGTATGCGGTGCACTGCACTGTGATTTCATAGTGAATTCCGGttcaaaaaaatcaaaatgcaaTCCTGCCGCTGCTGCAAGGAATAAACATCTGTGTGAGAGCTTAGCTGATAGTTGTTTTCCACTTAGTGAGGGTCCTGCAGCTGGCCGACTTCACGAATTCTTCTTGCGCCAATTCTGTGATGCCCACACCTGCACTGGAAGTCAGAAACCCTTCTCTAGAGGGCGTAGGTTTTGGTTCATGTGGTTCTCTGTTTTCATACAAGTCCCCAAAATTGTGATATGTCTTGTCCATGGTGCTATTCCATTCACATCTCTGCCTTTACTGGAGCCTCTTCCACTTCCTCTCTGCCCAAATTCTCAAACTCCCTGA 843 0.4306 MKKIWGRRHHRWVVFCIASLCVSSLLFTRVSSTSSPTLNTDHGETDSTVGRSSRQEQSGNHEIHCSRERSRAAWKIIEEYLMPFVEKERYQLSKKCRLNPDNDLYRDQEQHKSHRDINEWQCGYCKKVFYEEKHLDLHFDNRHSNLLDPSQRKCLADVCGALHCDFIVNSGSKKSKCNPAAAARNKHLCESLADSCFPLSEGPAAGRLHEFFLRQFCDAHTCTGSQKPFSRGRRFWFMWFSVFIQVPKIVICLVHGAIPFTSLPLLEPLPLPLCPNSQTP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1916 280 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 21 247 - -
Sto5g1916 280 MobiDBLite consensus disorder prediction 32 56 - -
Sto5g1916 280 ProSitePatterns Zinc finger C2H2 type domain signature. 122 143 IPR013087 -
Sto5g1916 280 MobiDBLite consensus disorder prediction 32 62 - -
Sto5g1916 280 PANTHER ZINC FINGER PROTEIN-RELATED 21 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1916 Sto-Chr5 14253245 14259927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1916 44 246 C2H2 Transcription Factor Family AT5G63280 63.054 1.46e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto5g1916 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1916 - - lang:109338698 358.607