Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1866 ATGGATATCTCCGACCTTAGAGAAGTGGATGAAACTTGTAACCTAGATTGGGAAAAAGCTTTGAGTCAGTTTCAGAATGTGATGGTCTCAGGAACCATGGGTATGCAAATAaaagccatgattatgcttgCCCATCAATCCAAACATGCTCCTGAGAGTGTATTATCTCGCATCATACCTCACCTCACTGGGATTCTTGGTGATTACCAATCTAATCAATCATCAGGTTTTTCTCTTCAAAAGGCTTCTGCTTATTGCTTGAAGTGTATAGCTTCTCGAGGTGATGGTGAGTTGGCAATGGAAATAGGTAGACATGGTGCTGCAACTTCTCTACTAAGGTGGTTGTCCCATTCTGATGGGGAGTTCCAAGAAGTCTTGATAAAATGTTTACTTGTTGTTGTCACTTTTTCGAACCGGAGTCGTGCCGCGGTAGCTAGCAGTGGAGGGCTAGAGATTATCATCAGTTTGTTAGATTTATGTACAGATGATGATATTAGGTTATACCTGTTGGAAATTTTGAGTGCATTGGCTTTGCTGAAGGATGTTAGGAGGGCACTTGCAAGATTCGGAGGTCTTCACTTGCTTGTGGAGGCTGCTAGTAGTGGCACCATGGTCTCTAGGGAAAGGGCTTGTCAAGCAATTGGGTTACTTGGGGTCCCAAGACGGTCGAGGCGAATGCTTATCGAAATTGGAGTGATACCGGTGCTTGTTGAGTTGCTTAGTGAAGGAGATGAAACCACAAAACTTGTGGCTGGTAATGCCCTTGGTGTGATCTCTGCTCATGTTGATTACATTAGACCAGTTGCTCAAGCTGGGGTTATCTCTCTTTATGCTGAGCTTCTTCAAGGACTTGAACGTACCGGCAAGGATATCGCGGAGGATGTGTTTTGTATATTGGCTGTTGCAGAGGAGAATGCAATTGAAATTGTGGGACATTTGGTGAGAATTCTTAGAGAAGGTGATGAGGAATCAAAGGCGTCTGCTGCTGAGGTGATGTGGGATCTCTCGGGTTATAAACATTCGGCATCTGTGATCCAGGAGTCGGGTGCGATTCCAATCCTAATTGAGCTTTTGCGGAGTGAAACTGAAGAGGTAAGGCAGAATGTTTCTGGGGCATGTGCTCAGCTGAGTTATGAAGAAGCAGATAGAATGGCACTTGCTGAAGCAGGGGCTATTCCTATTCTCATAGACATGATGCTGCACGATGAGCTCGAGGATGTAAGGGATAATGCAGCAGAGGCTCTTATCAATTTCGCCGGCGATCCTTTGTACAATAATAGAGTATCTGATGCAATTAGTTTTCCTTCATTTAGAGAGATACAGAACAGAATAACTTTCATCCGCGCTTCGAACGAACATATGGCTAGATCGATGCGAAGGATGAGTGATTGGCAGCTCACTTGGAACCCGGATCATGTTTAA 1422 0.4395 MDISDLREVDETCNLDWEKALSQFQNVMVSGTMGMQIKAMIMLAHQSKHAPESVLSRIIPHLTGILGDYQSNQSSGFSLQKASAYCLKCIASRGDGELAMEIGRHGAATSLLRWLSHSDGEFQEVLIKCLLVVVTFSNRSRAAVASSGGLEIIISLLDLCTDDDIRLYLLEILSALALLKDVRRALARFGGLHLLVEAASSGTMVSRERACQAIGLLGVPRRSRRMLIEIGVIPVLVELLSEGDETTKLVAGNALGVISAHVDYIRPVAQAGVISLYAELLQGLERTGKDIAEDVFCILAVAEENAIEIVGHLVRILREGDEESKASAAEVMWDLSGYKHSASVIQESGAIPILIELLRSETEEVRQNVSGACAQLSYEEADRMALAEAGAIPILIDMMLHDELEDVRDNAAEALINFAGDPLYNNRVSDAISFPSFREIQNRITFIRASNEHMARSMRRMSDWQLTWNPDHV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1866 473 PANTHER U BOX DOMAIN-CONTAINING 8 469 - -
Sto5g1866 473 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 8 469 - -
Sto5g1866 473 Pfam HEAT repeats 312 415 - -
Sto5g1866 473 SUPERFAMILY ARM repeat 60 419 IPR016024 -
Sto5g1866 473 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 349 391 IPR000225 GO:0005515
Sto5g1866 473 Gene3D - 305 433 IPR011989 -
Sto5g1866 473 Gene3D - 16 304 IPR011989 -
Sto5g1866 473 SMART arm_5 379 420 IPR000225 GO:0005515
Sto5g1866 473 SMART arm_5 294 337 IPR000225 GO:0005515
Sto5g1866 473 SMART arm_5 137 178 IPR000225 GO:0005515
Sto5g1866 473 SMART arm_5 220 260 IPR000225 GO:0005515
Sto5g1866 473 SMART arm_5 46 92 IPR000225 GO:0005515
Sto5g1866 473 SMART arm_5 338 378 IPR000225 GO:0005515
Sto5g1866 473 SMART arm_5 179 219 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1866 195 415 U-box Gene Family AT3G54850 28.194 6.62e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1866 - - gmx:100819735 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1866 5 13737793 13739214 Sto5g1866 5 13737793 13739214 ECH