Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1863 ATGGCTGCTTCTTCCATATCTGCCGCGTCATtacttccttctctttcttcccTGAATTCTAAGGCaaacttctctttcttctacttTCACTCCGGTGCCTCCTTCAAGCTTAAAGCCTCAAAACCTCTGCACTTATCATCAACTAGGGTTTATGCCGCTCCCGAAGTTTTGGATTCCCCTGAATCCCTGGACTCACCTCCAGAGAACCTAGATGACTCTGAACCCACTACCCTTGAGGTTGGAGACTTGGGGACTCCAAGTACTTCGTCACTTGGCATTGGTGCAGATGCAGATGCGATGGCACCAAAGCAGAAGATTAGAATCAAACTTAGATCTTATTGGGTTCCCCTGATAGAGGATTCATGCAAGCAGATAATGGATGCAGCAAGAAGTACCAATGCAAAAACTATGGGTCCTGTACCATTACCAACTAAAAAGAGAATTTACTGTGTTCTTAAATCGCCACATGTAAACAAGGATGCTCGGTTCCATTTCGAAATAAGAACCCATCAGCGTCTTATTGATATCCTACATCCTACTGCCCAAACAATAGATTCTTTGATGCAACTTGATCTTCCCGCTGGTGTTGATGTGGAGGTCAAGCTCTAA 609 0.4187 MAASSISAASLLPSLSSLNSKANFSFFYFHSGASFKLKASKPLHLSSTRVYAAPEVLDSPESLDSPPENLDDSEPTTLEVGDLGTPSTSSLGIGADADAMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARSTNAKTMGPVPLPTKKRIYCVLKSPHVNKDARFHFEIRTHQRLIDILHPTAQTIDSLMQLDLPAGVDVEVKL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1863 202 Hamap 30S ribosomal protein S10 [rpsJ]. 103 202 IPR001848 GO:0003735|GO:0005840|GO:0006412
Sto5g1863 202 Gene3D Ribosomal protein S10 domain 94 202 IPR036838 -
Sto5g1863 202 PANTHER BNAC05G40270D PROTEIN 40 202 - -
Sto5g1863 202 TIGRFAM rpsJ_bact: ribosomal protein uS10 104 201 IPR001848 GO:0003735|GO:0005840|GO:0006412
Sto5g1863 202 SMART Ribosomal_S10_2 107 201 IPR027486 -
Sto5g1863 202 MobiDBLite consensus disorder prediction 56 94 - -
Sto5g1863 202 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 40 202 IPR001848 GO:0003735|GO:0005840|GO:0006412
Sto5g1863 202 SUPERFAMILY Ribosomal protein S10 105 202 IPR036838 -
Sto5g1863 202 Pfam Ribosomal protein S10p/S20e 107 201 IPR027486 -
Sto5g1863 202 PRINTS Ribosomal protein S10 family signature 105 118 IPR001848 GO:0003735|GO:0005840|GO:0006412
Sto5g1863 202 PRINTS Ribosomal protein S10 family signature 140 155 IPR001848 GO:0003735|GO:0005840|GO:0006412
Sto5g1863 202 PRINTS Ribosomal protein S10 family signature 161 175 IPR001848 GO:0003735|GO:0005840|GO:0006412
Sto5g1863 202 ProSitePatterns Ribosomal protein S10 signature. 129 144 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1863 105 202 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 31.313 6.06e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1863 K02946 - qsu:111986192 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1863 5 13684064 13686821 Sto5g1863 5 13684064 13686821 ECH